RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 A0A1W2PR80 420 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 UGDHO60701 494 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 RAD51DO75771 328 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 STAMBPO95630 424 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 GIFP27352 417 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 SFTPDP35247 375 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 ALDH9A1P49189 494 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 CLK3P49761 638 aaKnown RBP12.83□□□□□ -0.36
VAMP4-202ENST00000367740 PRR5P85299 388 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 CHRNEQ04844 493 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 CPTPQ5TA50 214 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
VAMP4-202ENST00000367740 COMMD6Q7Z4G1 85 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 LILRA2Q8N149 483 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 METTL4Q8N3J2 472 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 SVOPLQ8N434 492 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 OR7G2Q8NG99 324 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 TRPC4APQ8TEL6 797 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 TM4SF18Q96CE8 201 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 BAG1Q99933 345 aaPredicted RBP12.83□□□□□ -0.36
VAMP4-202ENST00000367740 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 PSD2Q9BQI7 771 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 TBL1XR1Q9BZK7 514 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 TRIM5Q9C035 493 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 BCO1Q9HAY6 547 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 UTS2RQ9UKP6 389 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 PSME2Q9UL46 239 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 TRAF6Q9Y4K3 522 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
VAMP4-202ENST00000367740 A0A1W2PRB8 838 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 GUCY1B2O75343 617 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 SLU7O95391 586 aaKnown RBP12.82□□□□□ -0.36
VAMP4-202ENST00000367740 CLDN9O95484 217 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 IL33O95760 270 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 MANFP55145 182 aaKnown RBP12.82□□□□□ -0.36
VAMP4-202ENST00000367740 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
VAMP4-202ENST00000367740 DECR1Q16698 335 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 ARL13AQ5H913 290 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-202ENST00000367740 THSD4Q6ZMP0 1018 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 TRABD2AQ86V40 505 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 L3MBTL4Q8NA19 623 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 TRIM58Q8NG06 486 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 VRK1Q99986 396 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-202ENST00000367740 TSPY26PQ9H489 355 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 ESM1Q9NQ30 184 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 PFDN4Q9NQP4 134 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 MED17Q9NVC6 651 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 TAS2R9Q9NYW1 312 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 USP22Q9UPT9 525 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 SPEF1Q9Y4P9 236 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 TEX264Q9Y6I9 313 aa12.82□□□□□ -0.36
VAMP4-202ENST00000367740 IGHV3-15A0A0B4J1V0 119 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 ATP6V1G2-DDX39BF2Z307 99 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 DNALI1O14645 258 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-202ENST00000367740 PLOD3O60568 738 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 KERAO60938 352 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 PIAS1O75925 651 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 UTS2O95399 124 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 LTA4HP09960 611 aaKnown RBP12.81□□□□□ -0.36
VAMP4-202ENST00000367740 ARAFP10398 606 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 MTHFD2P13995 350 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 EPHA1P21709 976 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 ENPP1P22413 925 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 DLG1Q12959 904 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 CCNIQ14094 377 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 TRIP10Q15642 601 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 ZKSCAN8Q15776 578 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-202ENST00000367740 GRAMD1BQ3KR37 738 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 TCHHL1Q5QJ38 904 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-202ENST00000367740 SLC46A3Q7Z3Q1 461 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 ISCA2Q86U28 154 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 GLCCI1Q86VQ1 547 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 STAG3L4Q8TBR4 150 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 TSPAN17Q96FV3 270 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 JMJD8Q96S16 334 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 C1QTNF6Q9BXI9 259 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 COQ10BQ9H8M1 238 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 FKRPQ9H9S5 495 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 TIGARQ9NQ88 270 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 NTMQ9P121 344 aa12.81□□□□□ -0.36
VAMP4-202ENST00000367740 WNK1Q9H4A3 2382 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 RGS14O43566 566 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 SNUPNO95149 360 aaKnown RBP12.8□□□□□ -0.36
VAMP4-202ENST00000367740 RFX3P48380 749 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 ZNF41P51814 821 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-202ENST00000367740 GALNT1Q10472 559 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-202ENST00000367740 MLC1Q15049 377 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 SHQ1Q6PI26 577 aaKnown RBP12.8□□□□□ -0.36
VAMP4-202ENST00000367740 GOLGA7Q7Z5G4 137 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 SLC43A2Q8N370 569 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 CDYL2Q8N8U2 506 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 CDK15Q96Q40 435 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 ZNF300Q96RE9 604 aaPredicted RBP12.8□□□□□ -0.36
VAMP4-202ENST00000367740 SAP130Q9H0E3 1048 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 ANKZF1Q9H8Y5 726 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 AHSPQ9NZD4 102 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 ACOT9Q9Y305 439 aa12.8□□□□□ -0.36
VAMP4-202ENST00000367740 B4DSR2 109 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms