RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RFKQ969G6 155 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 KLHL15Q96M94 604 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 SGPP1Q9BX95 441 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 ISG20L2Q9H9L3 353 aaKnown RBP18.35■□□□□ 0.53
TRIM58-201ENST00000366481 NANSQ9NR45 359 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 MGAT4CQ9UBM8 478 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 A0A0B4J203 849 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 PRAMEF27A3QJZ7 478 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 FAM170BA6NMN3 283 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 SIGLEC5O15389 551 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 LILRB5O75023 590 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 POU3F2P20265 443 aaPredicted RBP18.35■□□□□ 0.53
TRIM58-201ENST00000366481 ZP3P21754 424 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 C21orf58P58505 322 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 SIGLEC14Q08ET2 396 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF671Q8TAW3 534 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 ASB12Q8WXK4 309 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 FAM46AQ96IP4 442 aaKnown RBP18.35■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF578Q96N58 590 aaPredicted RBP18.35■□□□□ 0.53
TRIM58-201ENST00000366481 FUZQ9BT04 418 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 AUP1Q9Y679 476 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 RPL3P39023 403 aaKnown RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF33BQ06732 778 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 PDE7AQ13946 482 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 MINDY4Q4G0A6 757 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 FAM198BQ6UWH4 519 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 NLRC3Q7RTR2 1065 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 CEACAM19Q7Z692 300 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 GOT1L1Q8NHS2 421 aaPredicted RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 HSD17B8Q92506 261 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 ARMC5Q96C12 935 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 TRMT61BQ9BVS5 477 aaKnown RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF416Q9BWM5 594 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 OR51I1Q9H343 314 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 FBXL2Q9UKC9 423 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 CEBPBP17676 345 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 BBS1Q8NFJ9 593 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 OR10H4Q8NGA5 316 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 TM4SF18Q96CE8 201 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 TTTY10Q9BZA0 68 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 CXXC1Q9P0U4 656 aaPredicted RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF69Q9UC07 566 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 SPTBN5Q9NRC6 3674 aaKnown RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 MEIKINA0A087WXM9 373 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 SLC9B1P1A6NJY1 282 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 PDCD5O14737 125 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 LCMT2O60294 686 aaKnown RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 RGS9O75916 674 aaPredicted RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 PPP2R1BP30154 601 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 ACVR1BP36896 505 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF273Q14593 569 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 SFRP5Q5T4F7 317 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 HBMQ6B0K9 141 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 PYHIN1Q6K0P9 492 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 NR2C2APQ86WQ0 139 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 LRRC56Q8IYG6 542 aaPredicted RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 KRT78Q8N1N4 520 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 OR2T4Q8NH00 348 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 ADAMTS14Q8WXS8 1223 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 TREX2Q9BQ50 279 aaPredicted RBP18.34■□□□□ 0.53
TRIM58-201ENST00000366481 BRWD1Q9NSI6 2320 aa18.34■□□□□ 0.53
TRIM58-201ENST00000366481 HMGN4O00479 90 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 GNSP15586 552 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 GSG1Q2KHT4 349 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 RNLSQ5VYX0 342 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF613Q6PF04 617 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 DGLUCYQ7Z3D6 616 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 SYT9Q86SS6 491 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 C17orf64Q86WR6 236 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 PDXPQ96GD0 296 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 OR1A2Q9Y585 309 aa18.33■□□□□ 0.53
TRIM58-201ENST00000366481 FOXE1O00358 373 aaPredicted RBP18.33■□□□□ 0.52
TRIM58-201ENST00000366481 BTCP35070 178 aa18.33■□□□□ 0.52
TRIM58-201ENST00000366481 OC90Q02509 493 aaPredicted RBP18.33■□□□□ 0.52
TRIM58-201ENST00000366481 DUSP6Q16828 381 aa18.33■□□□□ 0.52
TRIM58-201ENST00000366481 OAFQ86UD1 273 aa18.33■□□□□ 0.52
TRIM58-201ENST00000366481 OR6T1Q8NGN1 323 aa18.33■□□□□ 0.52
TRIM58-201ENST00000366481 CXorf40BQ96DE9 158 aa18.33■□□□□ 0.52
TRIM58-201ENST00000366481 FGF20Q9NP95 211 aaPredicted RBP18.33■□□□□ 0.52
TRIM58-201ENST00000366481 COPS3Q9UNS2 423 aa18.33■□□□□ 0.52
TRIM58-201ENST00000366481 CHST2Q9Y4C5 530 aa18.33■□□□□ 0.52
TRIM58-201ENST00000366481 ARPC5O15511 151 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 SFXN4Q6P4A7 337 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 SLC35C2Q9NQQ7 365 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 ACSL5Q9ULC5 683 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 WDR87Q6ZQQ6 2873 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 CPSF4LA6NMK7 179 aaKnown RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 CLTBP09497 229 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 RBMS1P29558 406 aaKnown RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 LASP1Q14847 261 aaKnown RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 NDUFA9Q16795 377 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 ZG16BQ96DA0 208 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 RSPRY1Q96DX4 576 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 NFKBIL1Q9UBC1 381 aaPredicted RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 NDOR1Q9UHB4 597 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 KCNMB2Q9Y691 235 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 ZNF106Q9H2Y7 1883 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms