RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 OTUB1Q96FW1 271 aaPredicted RBP7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 REXO5Q96IC2 774 aaKnown RBP7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 MARK4Q96L34 752 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 RNF145Q96MT1 663 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 TRMOQ9BU70 441 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 TXLNGYQ9BZA5 131 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 C12orf65Q9H3J6 166 aaKnown RBP7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 TMEM185BQ9H7F4 350 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 PPCSQ9HAB8 311 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 PLSCR4Q9NRQ2 329 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 UBQLN4Q9NRR5 601 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 GLRX2Q9NS18 164 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 ACSS1Q9NUB1 689 aaPredicted RBP7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 MED17Q9NVC6 651 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 OXSMQ9NWU1 459 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 CCL27Q9Y4X3 112 aa7.33□□□□□ -1.24
RNU4-59P-201ENST00000364447 NPIPB8E9PQR5 432 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 LSM1O15116 133 aaKnown RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 TBX19O60806 448 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 HSPA4LO95757 839 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 NUDT14O95848 222 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 SHBGP04278 402 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 KRT4P19013 534 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 EFNA1P20827 205 aaPredicted RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ATP6V1C1P21283 382 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 MAPK1P28482 360 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 SFTPDP35247 375 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 HPCAL1P37235 193 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 RPL3P39023 403 aaKnown RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 MAP3K8P41279 467 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 FRKP42685 505 aaPredicted RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 PTH2RP49190 550 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 PRIM2P49643 509 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 CARD18P57730 90 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 POU6F2P78424 691 aaPredicted RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 PPP2R2BQ00005 443 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 PDE7AQ13946 482 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 CTU2Q2VPK5 515 aaKnown RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 RFTN2Q52LD8 501 aaPredicted RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 CCNJQ5T5M9 372 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 CPTPQ5TA50 214 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 GTF2IRD2BQ6EKJ0 949 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ALKBH2Q6NS38 261 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ZCCHC12Q6PEW1 402 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 LRIG3Q6UXM1 1119 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ZNF704Q6ZNC4 412 aaPredicted RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ESPNLQ6ZVH7 1005 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 GTF2IRD2Q86UP8 949 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 C10orf107Q8IVU9 208 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 HOMEZQ8IX15 550 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 LILRA2Q8N149 483 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 CIARTQ8N365 385 aaPredicted RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 OR2T11Q8NH01 316 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 B4GALNT2Q8NHY0 566 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 HOXB13Q92826 284 aaPredicted RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 MTERF3Q96E29 417 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ARSGQ96EG1 525 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 FCRL1Q96LA6 429 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 NPAS1Q99742 590 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 BTBD2Q9BX70 525 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 GSX2Q9BZM3 304 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ACTR6Q9GZN1 396 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 CXorf56Q9H5V9 222 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 C12orf49Q9H741 205 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 TIGARQ9NQ88 270 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 ZCCHC3Q9NUD5 404 aaKnown RBP7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 NTMQ9P121 344 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 BAIAP2L1Q9UHR4 511 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 TMED5Q9Y3A6 229 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 SNX8Q9Y5X2 465 aa7.32□□□□□ -1.24
RNU4-59P-201ENST00000364447 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 A0A0J9YW62 118 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 A0A1W2PQD3 144 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 TRIM64A6NGJ6 449 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 TRIM64BA6NI03 449 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 TMEM114B3SHH9 223 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 H3BNH8 94 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 ADAMDEC1O15204 470 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 TRIM13O60858 407 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 HMGN2P05204 90 aaKnown RBP7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 THBDP07204 575 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 PABPC4LP0CB38 370 aaKnown RBP7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 BCKDHAP12694 445 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 IL11P20809 199 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 LOXP28300 417 aaPredicted RBP7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 ELK4P28324 431 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 PCSK6P29122 969 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 AGTR1P30556 359 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 EIF1P41567 113 aaKnown RBP7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 FOXF1Q12946 379 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 LASP1Q14847 261 aaKnown RBP7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 PCLAFQ15004 111 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 CD226Q15762 336 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 ZNF239Q16600 458 aaKnown RBP7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 SPDYE7PQ495Y7 208 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 TMEM201Q5SNT2 666 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 KANK2Q63ZY3 851 aa7.31□□□□□ -1.24
RNU4-59P-201ENST00000364447 RNF165Q6ZSG1 346 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms