RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 GPR50Q13585 617 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 FLYWCH1Q4VC44 716 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 KLHL22Q53GT1 634 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 RASSF6Q6ZTQ3 369 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 NRMQ8IXM6 262 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 RBCK1Q9BYM8 510 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 SATB2Q9UPW6 733 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 A8MU76 341 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 STK25O00506 426 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 CHST10O43529 356 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 PRG2P13727 222 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 MAP3K8P41279 467 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 RNF144AP50876 292 aaPredicted RBP20.99■□□□□ 0.95
LDB1-201ENST00000361198 SRSF5Q13243 272 aaKnown RBP20.99■□□□□ 0.95
LDB1-201ENST00000361198 CLEC12AQ5QGZ9 265 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 FIGNL1Q6PIW4 674 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 MCATQ8IVS2 390 aaKnown RBP20.99■□□□□ 0.95
LDB1-201ENST00000361198 STACQ99469 402 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 FGF20Q9NP95 211 aaPredicted RBP20.99■□□□□ 0.95
LDB1-201ENST00000361198 SLC7A7Q9UM01 511 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 GPR52Q9Y2T5 361 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 CMAHPQ9Y471 501 aa20.99■□□□□ 0.95
LDB1-201ENST00000361198 TNRC18O15417 2968 aaPredicted RBP20.99■□□□□ 0.95
LDB1-201ENST00000361198 PLD2O14939 933 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 PIP5K1CO60331 668 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 CCNKO75909 580 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 CSF2P04141 144 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 PTNP21246 168 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 RPS4Y1P22090 263 aaKnown RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 MAOBP27338 520 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 RFX2P48378 723 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 BAK1Q16611 211 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 ZMAT1Q5H9K5 638 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 ZNF544Q6NX49 715 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 ARL14Q8N4G2 192 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 OR6F1Q8NGZ6 308 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 ZNF486Q96H40 463 aaPredicted RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 NELL2Q99435 816 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 A0A0A6YYC8 382 aaPredicted RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 I3L1I5 382 aaPredicted RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 MSL3P1P0C860 447 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 GKN3PP0CG01 181 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 GPR4P46093 362 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 GLYR1Q49A26 553 aaPredicted RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 EIPR1Q53HC9 387 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 ZCCHC12Q6PEW1 402 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 MAP3K3Q99759 626 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 UBE2ZQ9H832 354 aaPredicted RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 ISYNA1Q9NPH2 558 aa20.98■□□□□ 0.95
LDB1-201ENST00000361198 RBMX2Q9Y388 322 aaKnown RBP20.98■□□□□ 0.95
LDB1-201ENST00000361198 TMEM129A0AVI4 362 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 GXYLT2A0PJZ3 443 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 CDRT1O95170 752 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 CBX7O95931 251 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 DBIP07108 87 aaKnown RBP20.97■□□□□ 0.95
LDB1-201ENST00000361198 GABRA3P34903 492 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 WNT4P56705 351 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 IFITM2Q01629 132 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 RAB40BQ12829 278 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 PLK5Q496M5 336 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 MRPL2Q5T653 305 aaKnown RBP20.97■□□□□ 0.95
LDB1-201ENST00000361198 GALNT12Q8IXK2 581 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 TMEM163Q8TC26 289 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 MED18Q9BUE0 208 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 TPK1Q9H3S4 243 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 CAPN10Q9HC96 672 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 NEK6Q9HC98 313 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 TMEM131Q92545 1883 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 IRGMA1A4Y4 181 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 PRODHO43272 600 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 SLC35E2P0CK97 266 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 IL7P13232 177 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 NID1P14543 1247 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 GNSP15586 552 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 FPR3P25089 353 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 TGM4P49221 684 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 NKX2-5P52952 324 aaPredicted RBP20.97■□□□□ 0.95
LDB1-201ENST00000361198 FZD5Q13467 585 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 TPBGQ13641 420 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 CCDC85BQ15834 202 aaPredicted RBP20.97■□□□□ 0.95
LDB1-201ENST00000361198 PRTGQ2VWP7 1150 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 MBOAT2Q6ZWT7 520 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 FAM174AQ8TBP5 190 aa20.97■□□□□ 0.95
LDB1-201ENST00000361198 PLEKHB1Q9UF11 243 aaPredicted RBP20.97■□□□□ 0.95
LDB1-201ENST00000361198 SF3B6Q9Y3B4 125 aaKnown RBP20.97■□□□□ 0.95
LDB1-201ENST00000361198 KLF4O43474 513 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 NME1P15531 152 aaKnown RBP20.96■□□□□ 0.95
LDB1-201ENST00000361198 MYL12AP19105 171 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 HTR2AP28223 471 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 CD38P28907 300 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 NR4A2P43354 598 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 FASLGP48023 281 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 ELOCQ15369 112 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 ARMC4Q5T2S8 1044 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 NXNL2Q5VZ03 156 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 LAPTM4BQ86VI4 370 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 VWA5B2Q8N398 1253 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 POGLUT1Q8NBL1 392 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 OR52R1Q8NGF1 315 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms