RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 LMF1Q96S06 567 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 DPYSL5Q9BPU6 564 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 EPHA6Q9UF33 1036 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 C11orf98E9PRG8 122 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 COX20Q5RI15 118 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 FIGNL1Q6PIW4 674 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 B3GLCTQ6Y288 498 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 SSX6Q7RTT6 188 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 PKMYT1Q99640 499 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 SEC61A2Q9H9S3 476 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 CLEC4EQ9ULY5 219 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 FAM227AF5H4B4 570 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 GDNFP39905 211 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 RIDAP52758 137 aaKnown RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 CYCSP99999 105 aaKnown RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 ENTPD8Q5MY95 495 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 LCTLQ6UWM7 567 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 STEAP2Q8NFT2 490 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 NDUFB11Q9NX14 153 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 B4DXG7 233 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 TARM1B6A8C7 271 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 HMGB3O15347 200 aaKnown RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 SSX5O60225 188 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 LALBAP00709 142 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 CD70P32970 193 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 KCNJ10P78508 379 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 PTPRRQ15256 657 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 SMAP2Q8WU79 429 aaPredicted RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 LRIG1Q96JA1 1093 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 ZIC5Q96T25 663 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 CDCA4Q9BXL8 241 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 CXCL16Q9H2A7 254 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 TDP1Q9NUW8 608 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 A0A0D9SG52 128 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 SERINC5Q86VE9 423 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 KLHDC8AQ8IYD2 350 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 ZNF619Q8N2I2 560 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 OR51L1Q8NGJ5 315 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 ACOT11Q8WXI4 607 aaPredicted RBP13.13□□□□□ -0.31
SMC5-201ENST00000361138 MS4A4EQ96PG1 132 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 MAN2C1Q9NTJ4 1040 aa13.13□□□□□ -0.31
SMC5-201ENST00000361138 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 MEIS3P1A6NDR6 274 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 ZNF726A6NNF4 738 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 GPX2P18283 190 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 CCKBRP32239 447 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 PSMB10P40306 273 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 TSPAN31Q12999 210 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 GNMTQ14749 295 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 TEAD2Q15562 447 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 ZDHHC4Q9NPG8 344 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 WASH6PQ9NQA3 447 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 MED17Q9NVC6 651 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 SLC6A5Q9Y345 797 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 H2BFMP0C1H6 154 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 SNRPBP14678 240 aaKnown RBP13.12□□□□□ -0.31
SMC5-201ENST00000361138 TUBG1P23258 451 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 CCR6P51684 374 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 TEKQ02763 1124 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 GLB1L2Q8IW92 636 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
SMC5-201ENST00000361138 IL17RDQ8NFM7 739 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 OR9A2Q8NGT5 310 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 SFXN5Q8TD22 340 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 SLC25A37Q9NYZ2 338 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 KCNIP3Q9Y2W7 256 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 FAM183AA6NL82 134 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 B4GALT2O60909 372 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 KCNK2O95069 426 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
SMC5-201ENST00000361138 NKPD1Q17RQ9 610 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 C1QTNF12Q5T7M4 302 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 SAXO2Q658L1 398 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 TRIB2Q92519 343 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 IRF7Q92985 503 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 CMKLR1Q99788 373 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 OR52D1Q9H346 318 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 LOXHD1Q8IVV2 1947 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 SRPX2O60687 465 aaPredicted RBP13.12□□□□□ -0.31
SMC5-201ENST00000361138 GALTP07902 379 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 PSMB1P20618 241 aaKnown RBP13.12□□□□□ -0.31
SMC5-201ENST00000361138 MC3RP41968 323 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 CRHR2Q13324 411 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.311e-5■□□□□ 9.3
SMC5-201ENST00000361138 L3MBTL4Q8NA19 623 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 SDR9C7Q8NEX9 313 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 PXT1Q8NFP0 134 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 NECTIN4Q96NY8 510 aa13.12□□□□□ -0.31
SMC5-201ENST00000361138 A0A0A6YYJ9 748 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 ZNF860A6NHJ4 632 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 UBL3O95164 117 aa13.11□□□□□ -0.31
SMC5-201ENST00000361138 SOD2P04179 222 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms