RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 AGLP35573 1532 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 HYAL4Q2M3T9 481 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 OR5D14Q8NGL3 314 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 INTS12Q96CB8 462 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 SMG9Q9H0W8 520 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 VSX1Q9NZR4 365 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 PPP1R3DO95685 299 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 SLC14A1Q13336 389 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 PTPRCAPQ14761 206 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 SPOCK3Q9BQ16 436 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 UNC13CQ8NB66 2214 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 TIMP2P16035 220 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 F2RL1P55085 397 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 SMIM12Q96EX1 92 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 FAM171A2A8MVW0 826 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 TERTO14746 1132 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 PRAF2O60831 178 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 SCO1O75880 301 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 KDELR2P33947 212 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 CTXN1P60606 82 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 TMEM201Q5SNT2 666 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 ZNF678Q5SXM1 525 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 RGMBQ6NW40 437 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 NANPQ8TBE9 248 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 ZNF596Q8TC21 504 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 COPS3Q9UNS2 423 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 OARD1Q9Y530 152 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 A0A087WZY1 265 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 ZNF92Q03936 586 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 SLC35F2Q8IXU6 374 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
CACNA1A-201ENST00000360228 H3BML4 177 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 GABARAPH6UMI1 98 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 GABARAPO95166 117 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 CBX7O95931 251 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 ITGB2P05107 769 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 NCBP2-AS2Q69YL0 99 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 ADIPOR1Q96A54 375 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 DUSP22Q9NRW4 184 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 ANKUB1A6NFN9 424 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 FBXO24O75426 580 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 SBSNQ6UWP8 590 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 OR5P2Q8WZ92 322 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 ACVRL1P37023 503 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 RPS15AP62244 130 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 SLC35A2P78381 396 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 C3orf38Q5JPI3 329 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 TXNDC5Q8NBS9 432 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 CREB3L4Q8TEY5 395 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 FOXRED1Q96CU9 486 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 CUTCQ9NTM9 273 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 PIGVQ9NUD9 493 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 SPTBN1Q01082 2364 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 LYRM1O43325 122 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 AKR1C1Q04828 323 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 FAM234AQ9H0X4 552 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 ZNF28P17035 718 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 FPGSQ05932 587 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 TPGS2Q68CL5 300 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 IL34Q6ZMJ4 242 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 MIB2Q96AX9 1013 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 NICN1Q9BSH3 213 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 OR10A5Q9H207 317 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 OR10A2Q9H208 303 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 HPRP00739 348 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 SERPINA2P20848 420 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 TAP2Q03519 686 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 LTC4SQ16873 150 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 TIGD5Q53EQ6 642 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 UBE2NLQ5JXB2 153 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 PLEKHS1Q5SXH7 462 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 PPP1R35Q8TAP8 253 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 FAM198AQ9UFP1 575 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 FAM96BQ9Y3D0 163 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 AKAP11Q9UKA4 1901 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 NUDT21O43809 227 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 RFC3P40938 356 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 GABARAPL2P60520 117 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 CMTM8Q8IZV2 173 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 FAM212BQ9NTI7 297 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 DIP2BQ9P265 1576 aa16.39■□□□□ 0.21
CACNA1A-201ENST00000360228 MSTNO14793 375 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 TCAPO15273 167 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 TGOLN2O43493 480 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 MAKP20794 623 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 PRR11Q96HE9 360 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 DPH2Q9BQC3 489 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 GKN1Q9NS71 199 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 TCRBV21S2A2A0A5A6 115 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 C17orf112F2Z3M2 114 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 FAM189A1O60320 539 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 MGAT3Q09327 533 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 MEF2DQ14814 521 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 DRICH1Q6PGQ1 229 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 DBX2Q6ZNG2 339 aa16.38■□□□□ 0.21
CACNA1A-201ENST00000360228 QRSL1Q9H0R6 528 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms