RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR52R1Q8NGF1 315 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 ADAMTS19Q8TE59 1207 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 NPIPB15A6NHN6 443 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-202ENST00000359082 RETP07949 1114 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 HSD17B1P14061 328 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 HNRNPA2B1P22626 353 aaKnown RBP17.32■□□□□ 0.36
SHANK1-202ENST00000359082 GDF1P27539 372 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 TTC9BQ8N6N2 239 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 FOXJ1Q92949 421 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 ARL11Q969Q4 196 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 APOOQ9BUR5 198 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 OR52A4PA6NMU1 304 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 C1orf196B1AJZ1 125 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 POU3F2P20265 443 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-202ENST00000359082 FOXA1P55317 472 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 Q6ZSR6 202 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 LANCL3Q6ZV70 420 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 ZNF679Q8IYX0 411 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 VWA5B2Q8N398 1253 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 IL1F10Q8WWZ1 152 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 SLAMF9Q96A28 289 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 SPO11Q9Y5K1 396 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 A0A0A6YYC8 382 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 A8MXE2 369 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 I3L1I5 382 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 POLR1CO15160 346 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 SNNO75324 88 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 SERPINE2P07093 398 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 ARSAP15289 507 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 CD68P34810 354 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 SLC6A8P48029 635 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 TMEM239Q8WW34 195 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 HHIPQ96QV1 700 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 MYADMQ96S97 322 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 ARHGAP39Q9C0H5 1083 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 A0A0J9YY10 115 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 ARPC1BO15143 372 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 CSF1P09603 554 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 EEF1A2Q05639 463 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 EIF4HQ15056 248 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 TRMT2BQ96GJ1 504 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 OR10A5Q9H207 317 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 OR10A2Q9H208 303 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 HIF1ANQ9NWT6 349 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 G3V2L1 256 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 CLDN2P57739 230 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 ZNF704Q6ZNC4 412 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 BBS1Q8NFJ9 593 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 RHBDD1Q8TEB9 315 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 CNOT11Q9UKZ1 510 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 PTRH2Q9Y3E5 179 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 TRAV27A0A087WT01 109 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 SULT2B1O00204 365 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 MT-ND4P03905 459 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 SUOXP51687 545 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 TAS2R31P59538 309 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 MRPL41Q8IXM3 137 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 RSC1A1Q92681 617 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 ELMOD3Q96FG2 381 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 SERPINA2P20848 420 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 MAGEA6P43360 314 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 RPS5P46782 204 aaKnown RBP17.31■□□□□ 0.36
SHANK1-202ENST00000359082 RGS6P49758 472 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 HOXC5Q00444 222 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 GDPD1Q8N9F7 314 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 NDUFAF4Q9P032 175 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
SHANK1-202ENST00000359082 DVL2O14641 736 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 BMP1P13497 986 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 MSR1P21757 451 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 NFATC4Q14934 902 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 PNPLA1Q8N8W4 532 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 ACVR1CQ8NER5 493 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 HAS2Q92819 552 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 SNAPC3Q92966 411 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 COQ10AQ96MF6 247 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 GNG13Q9P2W3 67 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 HPGDSO60760 199 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 DNAJB6O75190 326 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 WDPCPO95876 746 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 DDCP20711 480 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 PCGF2P35227 344 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 XCR1P46094 333 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 CDK5R2Q13319 367 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 SMAD2Q15796 467 aaKnown RBP17.3■□□□□ 0.36
SHANK1-202ENST00000359082 AGAP7PQ5VUJ5 663 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 METTL11BQ5VVY1 283 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 AGAP6Q5VW22 663 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 AGAP4Q96P64 663 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 ZNF736B4DX44 427 aaPredicted RBP17.3■□□□□ 0.36
SHANK1-202ENST00000359082 TBC1D20Q96BZ9 403 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 LINC00597Q9H2U6 94 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 GAAP10253 952 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 SERTAD2Q14140 314 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 MOB3CQ70IA8 216 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 BPHLQ86WA6 291 aaPredicted RBP17.3■□□□□ 0.36
SHANK1-202ENST00000359082 CD200R1Q8TD46 325 aa17.3■□□□□ 0.36
SHANK1-202ENST00000359082 COG8Q96MW5 612 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms