RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 KANSL1Q7Z3B3 1105 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 BMP8AQ7Z5Y6 402 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 OAFQ86UD1 273 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 COMTD1Q86VU5 262 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 PARGQ86W56 976 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 ARL14Q8N4G2 192 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 CPA6Q8N4T0 437 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 C12orf76Q8N812 135 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF527Q8NB42 609 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 OR13C2Q8NGS9 318 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 OR4Q3Q8NH05 313 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 ACOT11Q8WXI4 607 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-203ENST00000358528 CHFRQ96EP1 664 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 ELMOD3Q96FG2 381 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 MSLNLQ96KJ4 702 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 SGPP1Q9BX95 441 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 C1QTNF6Q9BXI9 259 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 PIGUQ9H490 435 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 TMEM27Q9HBJ8 222 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.15□□□□□ -1.43
CSDE1-203ENST00000358528 CALML5Q9NZT1 146 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 MAB21L2Q9Y586 359 aa6.15□□□□□ -1.43
CSDE1-203ENST00000358528 MEIS3P1A6NDR6 274 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ANKRD61A6NGH8 418 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 GRXCR1A8MXD5 290 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ARPC1BO15143 372 aaKnown RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 OR10H2O60403 315 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SLC22A5O76082 557 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 AIFM1O95831 613 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 LGI1O95970 557 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 HLA-DQA2P01906 255 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF250P15622 560 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 CST5P28325 142 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 BSGP35613 385 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 OPRD1P41143 372 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 FNTBP49356 437 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PDX1P52945 283 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PSMA6P60900 246 aaKnown RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 BTN1A1Q13410 526 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PDE7AQ13946 482 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 DHCR24Q15392 516 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SLC25A35Q3KQZ1 300 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 GXYLT1Q4G148 440 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF628Q5EBL2 1059 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 FAAP20Q6NZ36 180 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 LRRC28Q86X40 367 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 GJD3Q8N144 294 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SIRT6Q8N6T7 355 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SDR9C7Q8NEX9 313 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 OR52E2Q8NGJ4 325 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 OR14C36Q8NHC7 312 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TNFAIP8L1Q8WVP5 186 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PMEPA1Q969W9 287 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ARRDC3Q96B67 414 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 FCRL1Q96LA6 429 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF559Q9BR84 538 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 GTPBP2Q9BX10 602 aaKnown RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PINK1Q9BXM7 581 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 WDR26Q9H7D7 661 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ZSCAN32Q9NX65 697 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 RCE1Q9Y256 329 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PLEKHM1Q9Y4G2 1056 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 VWA8A3KMH1 1905 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 LAMA2P24043 3122 aaKnown RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3DA0A087WVF3 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3IA0A087WXS9 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3EA0A087X179 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3KA0A087X1G2 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TRBV2A0A0J9YWF9 115 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3FA6NER0 549 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3LB9A6J9 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 NRG2O14511 850 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 NPC1O15118 1278 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 IFNGP01579 166 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 CSN2P05814 226 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3HP0C7X1 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF3P17036 446 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 C4BPBP20851 252 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ITGB7P26010 798 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TRHRP34981 398 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ADH7P40394 386 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 E2F1Q01094 437 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 RGS1Q08116 209 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF155Q12901 538 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3GQ6DHY5 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3CQ6IPX1 549 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 UBE2Q1Q7Z7E8 422 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TBC1D3Q8IZP1 549 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TCTE3Q8IZS6 198 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 BOLLQ8N9W6 283 aaKnown RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SRFBP1Q8NEF9 429 aaKnown RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 OR2L2Q8NH16 312 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PFN4Q8NHR9 129 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PXYLP1Q8TE99 480 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 GHSRQ92847 366 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 CREB3L1Q96BA8 519 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 NXPE2Q96DL1 559 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 CCDC3Q9BQI4 270 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PCBD2Q9H0N5 130 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms