RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 YBEYP58557 167 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 ZNF33AQ06730 810 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 C11orf91Q3C1V1 193 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 DOK3Q7L591 496 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 BTLAQ7Z6A9 289 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 SUMF2Q8NBJ7 301 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 OR5AK2Q8NH90 309 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 CNN2Q99439 309 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 LMF2Q9BU23 707 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 DNAJB9Q9UBS3 223 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 DNAJB4Q9UDY4 337 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 AUP1Q9Y679 476 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 RGS9O75916 674 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 OXSR1O95747 527 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 OR8U8P0C7N1 319 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 ZNF182P17025 639 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 EMP2P54851 167 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 PIGFQ07326 219 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 PRAMEF20Q5VT98 475 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 FAM199XQ6PEV8 388 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 SGK3Q96BR1 496 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 CHRDQ9H2X0 955 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 PAK1IP1Q9NWT1 392 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 AQP7P3A6NL99 342 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 B4DXG7 233 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 HTRA2O43464 458 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 PABPC4LP0CB38 370 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 RNH1P13489 461 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 HLA-DOBP13765 273 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 GLB1P16278 677 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 EFNA3P52797 238 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 DAOAP59103 153 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 CRMP1Q14194 572 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 PLEKHS1Q5SXH7 462 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 RNLSQ5VYX0 342 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 UGT2A3Q6UWM9 527 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 CRELD2Q6UXH1 353 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 FAM57BQ71RH2 274 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 RLN3Q8WXF3 142 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 UTP23Q9BRU9 249 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 ERVMER34-1Q9H9K5 563 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 SLC2A6Q9UGQ3 507 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 RNF150Q9ULK6 438 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 PCDHGB6Q9Y5F9 930 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 ARL2-SNX15V9GYD0 113 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 LOC100130705A0A1B0GUX0 176 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 K7EQM0 130 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 DCNP07585 359 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 RAB3AP20336 220 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 HTR5AP47898 357 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 GSCP56915 257 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 SLC22A6Q4U2R8 563 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 NLRP8Q86W28 1048 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 CLDN19Q8N6F1 224 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 OR52P1PQ8NH57 321 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 POP5Q969H6 163 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 MFFQ9GZY8 342 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 INSL5Q9Y5Q6 135 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 F8W036 122 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 DNASE2O00115 360 aaPredicted RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 TOX4O94842 621 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 CSF2RAP15509 400 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 F8A1P23610 371 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 MRPL19P49406 292 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 SIM1P81133 766 aaPredicted RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 CARM1Q86X55 608 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 OR4F6Q8NGB9 312 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 CCDC74AQ96AQ1 378 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ZNF419Q96HQ0 510 aaPredicted RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 AMDHD1Q96NU7 426 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 SPACA1Q9HBV2 294 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 HLA-DPB1P04440 258 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 UFM1P61960 85 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ERVK-25P63136 954 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 Q6ZSR6 202 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 MEX3DQ86XN8 651 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 TMIEQ8NEW7 156 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 TMEM185AQ8NFB2 350 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ZNF384Q8TF68 577 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 PRRC1Q96M27 445 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 IER2Q9BTL4 223 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 PBX4Q9BYU1 374 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 DCSTAMPQ9H295 470 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 DZANK1Q9NVP4 752 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 SRRDQ9UH36 339 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 NPC1O15118 1278 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 MT-ND2P03891 347 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 GAAP10253 952 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 BCL6P41182 706 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 PTTG1IPP53801 180 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 UBE2IP63279 158 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 CNN3Q15417 329 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 TESK1Q15569 626 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 CLEC20AQ6ZU45 233 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms