RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TIAF1O95411 115 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 OXSR1O95747 527 aaPredicted RBP8.47□□□□□ -1.05
UPF2-202ENST00000357604 RAP2AP10114 183 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 NME2P22392 152 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 AHCYP23526 432 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SLC6A6P31641 620 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 TGIF1Q15583 401 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 HSPB2Q16082 182 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SLC36A3Q495N2 470 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.47□□□□□ -1.05
UPF2-202ENST00000357604 SPSB2Q99619 263 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 ADI1Q9BV57 179 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 TP63Q9H3D4 680 aaPredicted RBP8.47□□□□□ -1.05
UPF2-202ENST00000357604 SH3BGRL2Q9UJC5 107 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 KLHL21Q9UJP4 597 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 CIB4A0PJX0 185 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SRD5A2P31213 254 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 GAB1Q13480 694 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 DHRS4L2Q6PKH6 230 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 CYP2R1Q6VVX0 501 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 GRINAQ7Z429 371 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 KIF18BQ86Y91 864 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 DUSP19Q8WTR2 217 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 HSH2DQ96JZ2 352 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 HDHD5Q9BXW7 423 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 TMEM38AQ9H6F2 299 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 ASCL3Q9NQ33 180 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 GRHPRQ9UBQ7 328 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 FBXL3Q9UKT7 428 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 PTHP01270 115 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 ARAFP10398 606 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 THRBP10828 461 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 ELK4P28324 431 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 GABRA4P48169 554 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 UBE2NP61088 152 aaKnown RBP8.47□□□□□ -1.05
UPF2-202ENST00000357604 KCNJ10P78508 379 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 HSF2Q03933 536 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SNCBQ16143 134 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 KRT80Q6KB66 452 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 GALNTL5Q7Z4T8 443 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 CARM1Q86X55 608 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 OFCC1Q8IZS5 231 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 ANKFN1Q8N957 763 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 OR9I1Q8NGQ6 314 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SLC35B4Q969S0 331 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 TUBB1Q9H4B7 451 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 VDAC3Q9Y277 283 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 TP53TG5Q9Y2B4 290 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 SPEF1Q9Y4P9 236 aa8.47□□□□□ -1.05
UPF2-202ENST00000357604 MYO10Q9HD67 2058 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 ICOSLGO75144 302 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 TGM1P22735 817 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 SELENOVP59797 346 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 SLC43A2Q8N370 569 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 OR2M7Q8NG81 312 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 OR6N1Q8NGY5 312 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 ZNF317Q96PQ6 595 aaPredicted RBP8.46□□□□□ -1.05
UPF2-202ENST00000357604 RBP7Q96R05 134 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 TRIB1Q96RU8 372 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 MOV10Q9HCE1 1003 aaKnown RBP8.46□□□□□ -1.05
UPF2-202ENST00000357604 BAIAP2Q9UQB8 552 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 AP4S1Q9Y587 144 aa8.46□□□□□ -1.05
UPF2-202ENST00000357604 SYT5O00445 386 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 FAAHO00519 579 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 NKX2-2O95096 273 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ZNF17P17021 662 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 IL32P24001 234 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 TRIM25Q14258 630 aaKnown RBP8.46□□□□□ -1.06
UPF2-202ENST00000357604 ZFP90Q8TF47 636 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 GIPC3Q8TF64 312 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 KLHL9Q9P2J3 617 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 BLOC1S6Q9UL45 172 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 UPK1AO00322 258 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 DVL2O14641 736 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 SLC43A1O75387 559 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 FBXO45P0C2W1 286 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ETFAP13804 333 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 POU1F1P28069 291 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 PLP2Q04941 152 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 E2F2Q14209 437 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ANKDD1AQ495B1 522 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ADNP2Q6IQ32 1131 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ARL9Q6T311 187 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 PTRH1Q86Y79 214 aaKnown RBP8.46□□□□□ -1.06
UPF2-202ENST00000357604 OR5D16Q8NGK9 328 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ELP5Q8TE02 316 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 HAS2Q92819 552 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 SMURF2Q9HAU4 748 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 SCN3BQ9NY72 215 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 MED11Q9P086 117 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 GPR55Q9Y2T6 319 aaPredicted RBP8.46□□□□□ -1.06
UPF2-202ENST00000357604 FTCDNL1E5RQL4 147 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 H0YC42 278 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 SUSD5O60279 629 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ABCD3P28288 659 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 CSRP3P50461 194 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 SOX8P57073 446 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 TLE3Q04726 772 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 NTRK2Q16620 822 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 ALG10BQ5I7T1 473 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms