RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CST6Q15828 149 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 SLC14A2Q15849 920 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 UEVLDQ8IX04 471 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 SDR9C7Q8NEX9 313 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 NPAP1Q9NZP6 1156 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 NENFQ9UMX5 172 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 DUX1O43812 170 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 BRINP1O60477 761 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 SNAPINO95295 136 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 MT-ND4P03905 459 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 UBBP0CG47 229 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 UBCP0CG48 685 aaKnown RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 CTHP32929 405 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 SMN1Q16637 294 aaKnown RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 FAM83HQ6ZRV2 1179 aaPredicted RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 MEPCEQ7L2J0 689 aaKnown RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 OR13F1Q8NGS4 319 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 TOMM40LQ969M1 308 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 C4orf36Q96KX1 117 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 PRDM9Q9NQV7 894 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 B4GALT7Q9UBV7 327 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 GPR34Q9UPC5 381 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 ACTL7AQ9Y615 435 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 GAPDHSO14556 408 aaPredicted RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 CNOT4O95628 575 aaKnown RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 SLC6A8P48029 635 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 ZNF91Q05481 1191 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 C1orf61Q13536 156 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 AGAP7PQ5VUJ5 663 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 DNAJC5GQ8N7S2 189 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 GPR26Q8NDV2 337 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 BPIFA2Q96DR5 249 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 TCEAL7Q9BRU2 100 aa13.98□□□□□ -0.17
CHD4-201ENST00000357008 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
CHD4-201ENST00000357008 A6NIZ1 184 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 DRGXA6NNA5 263 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 TP53P04637 393 aaPredicted RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 FASLGP48023 281 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 SNU13P55769 128 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 RAP1BP61224 184 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 RAP1AP62834 184 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 FGL2Q14314 439 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 ZNF585AQ6P3V2 769 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 ZC3H14Q6PJT7 736 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 NRARPQ7Z6K4 114 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 OR5T1Q8NG75 326 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 ZBTB8AQ96BR9 441 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 A6NLC8 198 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 SERPINA5P05154 406 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 CHRNB1P11230 501 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 ARSBP15848 533 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 MMP12P39900 470 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 PGGHGQ32M88 737 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 TCTE1Q5JU00 501 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 TSSK4Q6SA08 328 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 DEFB119Q8N690 84 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 FNDC9Q8TBE3 224 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 PDLIM5Q96HC4 596 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 MYH3P11055 1940 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 HTR3BO95264 441 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 ACPPP15309 386 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 IL13RA1P78552 427 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 SERTAD2Q14140 314 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 B3GNT9Q6UX72 402 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 UNQ6126/PRO20091Q6UXV3 157 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 ZNF695Q8IW36 515 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 SIMC1Q8NDZ2 872 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 OR52D1Q9H346 318 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 RANGRFQ9HD47 186 aaPredicted RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 MYEF2Q9P2K5 600 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 AQP9O43315 295 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 RAB3AP20336 220 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 CD6P30203 668 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 TRA2BP62995 288 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 C14orf28Q4W4Y0 310 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 PIP5KL1Q5T9C9 394 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 LRRC56Q8IYG6 542 aaPredicted RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 USP36Q9P275 1121 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 FAM230AA0A1W2PPH8 454 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 AGPAT2O15120 278 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 NUPL2O15504 423 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 RAB40ALP0C0E4 278 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 UBL4AP11441 157 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 BMP4P12644 408 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 ZNF43P17038 809 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 MLC1Q15049 377 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 MRPL10Q7Z7H8 261 aaKnown RBP13.97□□□□□ -0.17
CHD4-201ENST00000357008 CMTM1Q8IZ96 169 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 C3orf58Q8NDZ4 430 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 TMEM40Q8WWA1 233 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 RAB40AQ8WXH6 277 aa13.97□□□□□ -0.17
CHD4-201ENST00000357008 TCRBV21S2A2A0A5A6 115 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 GGT3PA6NGU5 568 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 NPC1O15118 1278 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 SEC14L2O76054 403 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 CCL5P13501 91 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 JUNDP17535 347 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 SSTR2P30874 369 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 GLO1Q04760 184 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 IRF4Q15306 451 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms