RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 UQCRFS1P47985 274 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 RFX3P48380 749 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ATP12AP54707 1039 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CASP6P55212 293 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 PER3P56645 1201 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 DSTNP60981 165 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 RPS26P62854 115 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FUT5Q11128 374 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 KLF10Q13118 480 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 MRPL49Q13405 166 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 GNA13Q14344 377 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF141Q15928 474 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF630Q2M218 657 aaPredicted RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 GTDC1Q4AE62 458 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FLYWCH1Q4VC44 716 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FNDC7Q5VTL7 733 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 PRAMEF8Q5VWM4 474 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 PRAMEF7Q5VXH5 474 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CLEC18BQ6UXF7 455 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF621Q6ZSS3 439 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ZAR1Q86SH2 424 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 RNF130Q86XS8 419 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SPPL2CQ8IUH8 684 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 EID3Q8N140 333 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF619Q8N2I2 560 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CLEC18CQ8NCF0 446 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 TOR1AIP2Q8NFQ8 470 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 OR2M3Q8NG83 312 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 PMM1Q92871 262 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 JSRP1Q96MG2 331 aaPredicted RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 TRNT1Q96Q11 434 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 TPT1P8Q9HAU6 139 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 GALNT9Q9HCQ5 603 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ACKR4Q9NPB9 350 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SAR1AQ9NR31 198 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 UBQLN4Q9NRR5 601 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 DKKL1Q9UK85 242 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 NDUFAF1Q9Y375 327 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 MRPS18CQ9Y3D5 142 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 LIPGQ9Y5X9 500 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 KCNE3Q9Y6H6 103 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ATRXP46100 2492 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 TLN1Q9Y490 2541 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CELSR3Q9NYQ7 3312 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 A0A087WZY1 265 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 TRGV5A0A0B4J1U4 118 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 A0A1B0GUH1 482 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 GMNCA6NCL1 334 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 TMEM247A6NEH6 219 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FAM47E-STBD1D6RA91 191 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 H3BNH8 94 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 HMGN4O00479 90 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SNX3O60493 162 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CDC40O60508 579 aaKnown RBP eCLIP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ANGPTL1O95841 491 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 GSNP06396 782 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ABOP16442 354 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF17P17021 662 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 RPS4Y1P22090 263 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CA7P43166 264 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 MVDP53602 400 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 C17orf67Q0P5P2 114 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SLC10A1Q14973 349 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 TRMT5Q32P41 509 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 GLYR1Q49A26 553 aaPredicted RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 NHSL2Q5HYW2 709 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 PAGE3Q5JUK9 113 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 GCNT6Q5T4J0 391 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CCNJQ5T5M9 372 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 AP1ARQ63HQ0 302 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 REP15Q6BDI9 236 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 MTFR2Q6P444 385 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ARHGAP11AQ6P4F7 1023 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FRRS1Q6ZNA5 592 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 LRRC74BQ6ZQY2 392 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FGD2Q7Z6J4 655 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CHERPQ8IWX8 916 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 MSRB3Q8IXL7 192 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 CLEC4FQ8N1N0 589 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 METTL25Q8N6Q8 603 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FAM83FQ8NEG4 500 aaPredicted RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 NEIL3Q8TAT5 605 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 FAM57AQ8TBR7 257 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 PHF10Q8WUB8 498 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 RELTQ969Z4 430 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SARAFQ96BY9 339 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ROPN1LQ96C74 230 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SDF2Q99470 211 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SLC6A15Q9H2J7 730 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 LDAHQ9H6V9 325 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 C7orf69Q9H7B7 122 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 A4GALTQ9NPC4 353 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SLC6A13Q9NSD5 602 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 SUCOQ9UBS9 1254 aaKnown RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.61□□□□□ -1.83
CNOT4-202ENST00000356162 WDR45Q9Y484 360 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 DTNAQ9Y4J8 743 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 PCDHB14Q9Y5E9 798 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 ZFYVE26Q68DK2 2539 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 DSPPQ9NZW4 1301 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms