RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 NPIPB9F8W1W9 429 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 NDUFS3O75489 264 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 SDHAP31040 664 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 GDNFP39905 211 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 PNLIPRP2P54317 469 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 MAXP61244 160 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 SRSF11Q05519 484 aaKnown RBP14.72□□□□□ -0.05
RTN3-205ENST00000356000 PYY3Q5JQD4 70 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 SFXN4Q6P4A7 337 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 HIST1H2BAQ96A08 127 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 PHYHIPLQ96FC7 376 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 UTP23Q9BRU9 249 aaKnown RBP14.72□□□□□ -0.05
RTN3-205ENST00000356000 ABCG8Q9H221 673 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 PRDM13Q9H4Q3 707 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 NOX3Q9HBY0 568 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 NT5MQ9NPB1 228 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 KCND3Q9UK17 655 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 NAP1L6A6NFF2 107 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 CACNB4O00305 520 aaPredicted RBP14.72□□□□□ -0.05
RTN3-205ENST00000356000 CTDSPLO15194 276 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 TAPBPO15533 448 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 IFNA10P01566 189 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 EBLN1P0CF75 366 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 INSRRP14616 1297 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 NQO2P16083 231 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 MECP2P51608 486 aaKnown RBP14.72□□□□□ -0.05
RTN3-205ENST00000356000 PPA1Q15181 289 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 KCNA10Q16322 511 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 LIN54Q6MZP7 749 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 FBXO15Q8NCQ5 510 aaPredicted RBP14.72□□□□□ -0.05
RTN3-205ENST00000356000 SMAP2Q8WU79 429 aaPredicted RBP14.72□□□□□ -0.05
RTN3-205ENST00000356000 SMIM4Q8WVI0 70 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 SOCS4Q8WXH5 440 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 EDEM1Q92611 657 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 CDKN2AIPNLQ96HQ2 116 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 SCLYQ96I15 445 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 CMTM3Q96MX0 182 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 C19orf43Q9BQ61 176 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 DUSP26Q9BV47 211 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 SMCO4Q9NRQ5 59 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 FAM120CQ9NX05 1096 aaKnown RBP14.72□□□□□ -0.05
RTN3-205ENST00000356000 CPA4Q9UI42 421 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 TP53TG5Q9Y2B4 290 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 TRBV4-1A0A0J9YWV2 114 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 URADA6NGE7 173 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 MCIDASD6RGH6 385 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 ANHXE9PGG2 379 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 AP4M1O00189 453 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 FFAR2O15552 330 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 BRINP1O60477 761 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 SLC25A12O75746 678 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 PKMP14618 531 aaKnown RBP14.71□□□□□ -0.05
RTN3-205ENST00000356000 PRPS1L1P21108 318 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 PPIBP23284 216 aaKnown RBP14.71□□□□□ -0.05
RTN3-205ENST00000356000 PMELP40967 661 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 DAOAP59103 153 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 EFNB1P98172 346 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 ITKQ08881 620 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 SSPNQ14714 243 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 CELF5Q8N6W0 485 aaKnown RBP14.71□□□□□ -0.05
RTN3-205ENST00000356000 OR5J2Q8NH18 312 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 AP5M1Q9H0R1 490 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 PRO3102Q9H379 93 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 GFOD1Q9NXC2 390 aa14.71□□□□□ -0.05
RTN3-205ENST00000356000 GSAPA4D1B5 854 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 F5H5P2 479 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 HYAL3O43820 417 aaPredicted RBP14.71□□□□□ -0.06
RTN3-205ENST00000356000 RGS9O75916 674 aaPredicted RBP14.71□□□□□ -0.06
RTN3-205ENST00000356000 ZXDBP98169 803 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 C18orf63Q68DL7 685 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 SBSNQ6UWP8 590 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 TGIF2LXQ8IUE1 241 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 CARFQ8N187 725 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 IQCF1Q8N6M8 205 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 OR5M1Q8NGP8 315 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 FDXACB1Q9BRP7 624 aaPredicted RBP14.71□□□□□ -0.06
RTN3-205ENST00000356000 ULBP1Q9BZM6 244 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 ZDHHC5Q9C0B5 715 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 ELOVL2Q9NXB9 296 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 KLHL42Q9P2K6 505 aa14.71□□□□□ -0.06
RTN3-205ENST00000356000 C1orf226A1L170 272 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 BTBD17A6NE02 478 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 LOC730098B7Z3J9 87 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 CHST10O43529 356 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 POU4F2Q12837 409 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 TCEAL6Q6IPX3 200 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 TMEM71Q6P5X7 295 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 MISP3Q96FF7 219 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 CNTNAP3BQ96NU0 1288 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 GINS4Q9BRT9 223 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 NAA11Q9BSU3 229 aaPredicted RBP14.7□□□□□ -0.06
RTN3-205ENST00000356000 POLR2J3Q9H1A7 115 aaKnown RBP14.7□□□□□ -0.06
RTN3-205ENST00000356000 TLR8Q9NR97 1041 aaKnown RBP14.7□□□□□ -0.06
RTN3-205ENST00000356000 UXTQ9UBK9 157 aaPredicted RBP14.7□□□□□ -0.06
RTN3-205ENST00000356000 LAMP5Q9UJQ1 280 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 OR6C76A6NM76 312 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 YY2O15391 372 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 ACTL6AO96019 429 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 PDYNP01213 254 aa14.7□□□□□ -0.06
RTN3-205ENST00000356000 ETFAP13804 333 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms