RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TIMM10BQ9Y5J6 103 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CRYBG1Q9Y4K1 1723 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CHD2O14647 1828 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 WNK3Q9BYP7 1800 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CHEK1O14757 476 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 LRRTM2O43300 516 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 KCNAB3O43448 404 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PCDH7O60245 1069 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SH3BGRLO75368 114 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 OR9G9P0C7N8 305 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GIFP27352 417 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SLC11A1P49279 550 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CSNK1EP49674 416 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PLOD1Q02809 727 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF85Q03923 595 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF33BQ06732 778 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NECTIN1Q15223 517 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 DCAF4L1Q3SXM0 396 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 POM121L1PQ3SYA9 428 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FAM76BQ5HYJ3 339 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 AGBL2Q5U5Z8 902 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 WSCD1Q658N2 575 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FAM53AQ6NSI3 398 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 KIAA1161Q6NSJ0 714 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FOXL2NBQ6ZUU3 175 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CENPUQ71F23 418 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CCDC80Q76M96 950 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SMIM29Q86T20 159 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SPATA2LQ8IUW3 424 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RFLNBQ8N5W9 214 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 STPG4Q8N801 248 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NIPA2Q8N8Q9 360 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 MFSD9Q8NBP5 474 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 BBOF1Q8ND07 529 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 OR5AU1Q8NGC0 362 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 OR9Q2Q8NGE9 314 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 OR4D5Q8NGN0 318 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 OR1F12Q8NHA8 337 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 C8orf46Q8TAG6 207 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SPRYD4Q8WW59 207 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TMIGD2Q96BF3 282 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 C12orf66Q96MD2 445 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TGM7Q96PF1 710 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NXF5Q9H1B4 397 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 OR2AG1Q9H205 316 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GLIPR2Q9H4G4 154 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NCOR1P1Q9H4R4 102 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 WDR41Q9HAD4 459 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 THAP10Q9P2Z0 257 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GHRLQ9UBU3 117 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ERRFI1Q9UJM3 462 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PRKDCP78527 4128 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GPATCH8Q9UKJ3 1502 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SNTNA6NMZ2 147 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 E9PMD0 336 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 H3BMQ9 156 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SGK494L7N484 410 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 LSM1O15116 133 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CAPN1P07384 714 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 POLR2MP0CAP2 368 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 STAG3L3P0CL85 134 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GP9P14770 177 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ITGA3P26006 1051 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 MATKP42679 507 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GSSP48637 474 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CCT3P49368 545 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RGS1Q08116 209 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RBBP5Q15291 538 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF585BQ52M93 769 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PXDC1Q5TGL8 231 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 C11orf87Q6NUJ2 197 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RNASEKQ6P5S7 137 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM220Q6QAJ8 160 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SLC26A9Q7LBE3 791 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NAGSQ8N159 534 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GOLGA5Q8TBA6 731 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ARNTL2Q8WYA1 636 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CD101Q93033 1021 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF524Q96C55 264 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TPD52L3Q96J77 140 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RBM14Q96PK6 669 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CLEC7AQ9BXN2 247 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TDRD1Q9BXT4 1180 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GEMIN7Q9H840 131 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RAB20Q9NX57 234 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PCSK1NQ9UHG2 260 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF639Q9UID6 485 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CAB39Q9Y376 341 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SLIT1O75093 1534 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 LRRC37A3O60309 1634 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 VPS13BQ7Z7G8 4022 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NHSQ6T4R5 1651 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 AQRO60306 1485 aaKnown RBP eCLIP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FMN1Q68DA7 1419 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SETD5Q9C0A6 1442 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 A0A075B6Q4 140 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 LOC105371242A0A075B767 164 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 MEX3AA1L020 520 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RGS16O15492 202 aaPredicted RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms