RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MAGED1Q9Y5V3 778 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 A6NLC8 198 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 CD300LGQ6UXG3 332 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ACOT11Q8WXI4 607 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 PLA2G2FQ9BZM2 168 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 RNF215Q9Y6U7 377 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF432O94892 652 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 MAOAP21397 527 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 DAP3P51398 398 aaKnown RBP13.94□□□□□ -0.18
COL17A1-201ENST00000353479 GABARAPL2P60520 117 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 KCNAB1Q14722 419 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 BCL2L15Q5TBC7 163 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 CXorf36Q9H7Y0 433 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 AGPAT4Q9NRZ5 378 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 PCDHGB6Q9Y5F9 930 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 YY2O15391 372 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 RGS9O75916 674 aaPredicted RBP13.94□□□□□ -0.18
COL17A1-201ENST00000353479 MTHFD2P13995 350 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 TMBIM6P55061 237 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 SWI5Q1ZZU3 235 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 C3orf38Q5JPI3 329 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 DGLUCYQ7Z3D6 616 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 OR8S1Q8NH09 359 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF420Q8TAQ5 688 aaPredicted RBP13.94□□□□□ -0.18
COL17A1-201ENST00000353479 DMRTB1Q96MA1 342 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 GPR78Q96P69 363 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 LTB4R2Q9NPC1 389 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 SPHK1Q9NYA1 384 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 EXTL2Q9UBQ6 330 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 MAS1P04201 325 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 SLC19A1P41440 591 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 HTR3AP46098 478 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 RPS5P46782 204 aaKnown RBP13.94□□□□□ -0.18
COL17A1-201ENST00000353479 GPLD1P80108 840 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF829Q3KNS6 432 aaPredicted RBP13.94□□□□□ -0.18
COL17A1-201ENST00000353479 PRAMEF17Q5VTA0 474 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 SLC38A5Q8WUX1 472 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 CHTF18Q8WVB6 975 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 GLIPR2Q9H4G4 154 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 SLC6A14Q9UN76 642 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 NUMA1Q14980 2115 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 A0A1W2PPC4 97 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 CLCA1A8K7I4 914 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 NARSO43776 548 aaKnown RBP13.94□□□□□ -0.18
COL17A1-201ENST00000353479 ICAM2P13598 275 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 EEF1A1P68104 462 aaKnown RBP13.94□□□□□ -0.18
COL17A1-201ENST00000353479 TMEM64Q6YI46 380 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 TMED4Q7Z7H5 227 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 OR5T2Q8NGG2 359 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 GLS2Q9UI32 602 aa13.94□□□□□ -0.18
COL17A1-201ENST00000353479 GFYI3L273 518 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 KIAA0513O60268 411 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 PRAMEF20Q5VT98 475 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 SLC35F2Q8IXU6 374 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF565Q8N9K5 539 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 ATG5Q9H1Y0 275 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 MCTS1Q9ULC4 181 aaKnown RBP13.93□□□□□ -0.18
COL17A1-201ENST00000353479 TCRBV3S1A0A5B6 114 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 APOC1P02654 83 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 VAMP1P23763 118 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 CRABP1P29762 137 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 EPHA4P54764 986 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 EIF2B1Q14232 305 aaKnown RBP13.93□□□□□ -0.18
COL17A1-201ENST00000353479 PAPD4Q6PIY7 484 aaKnown RBP13.93□□□□□ -0.18
COL17A1-201ENST00000353479 DTX3Q8N9I9 347 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 ELP5Q8TE02 316 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 FRMD6Q96NE9 622 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 AMDHD1Q96NU7 426 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 SCGB3A2Q96PL1 93 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 C1QTNF2Q9BXJ5 285 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 DPAGT1Q9H3H5 408 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 PAK1IP1Q9NWT1 392 aaPredicted RBP13.93□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF69Q9UC07 566 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 PMF1-BGLAPU3KQ54 211 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 PLPP1O14494 284 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 PCDH17O14917 1159 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 IDUAP35475 653 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 POU3F4P49335 361 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 PRKXP51817 358 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 SLC48A1Q6P1K1 146 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 LIX1LQ8IVB5 337 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 SPNS2Q8IVW8 549 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 TIGD4Q8IY51 512 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 TUBA1CQ9BQE3 449 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 TUBB1Q9H4B7 451 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 FOLH1BQ9HBA9 442 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 GGT3PA6NGU5 568 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 A6NIZ1 184 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 FTCDNL1E5RQL4 147 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 SMAD9O15198 467 aaKnown RBP13.93□□□□□ -0.18
COL17A1-201ENST00000353479 FZD6O60353 706 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 GLP1RP43220 463 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 RAP1BP61224 184 aa13.93□□□□□ -0.18
COL17A1-201ENST00000353479 RAP1AP62834 184 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms