RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ART5Q96L15 291 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 IRF2BPLQ9H1B7 796 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 TRIM36Q9NQ86 728 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 ENAMQ9NRM1 1142 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 WDR45Q9Y484 360 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 LAMA3Q16787 3333 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 CENPVL1A0A0U1RR11 272 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 RFX3P48380 749 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 CLDN2P57739 230 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 STXBP1P61764 594 aaKnown RBP22.82■■□□□ 1.24
CPNE1-202ENST00000352393 EEF1A1P68104 462 aaKnown RBP22.82■■□□□ 1.24
CPNE1-202ENST00000352393 IL20RBQ6UXL0 311 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 ZNF767PQ75MW2 155 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 OAFQ86UD1 273 aa22.82■■□□□ 1.24
CPNE1-202ENST00000352393 AHCYL2Q96HN2 611 aaKnown RBP22.82■■□□□ 1.24
CPNE1-202ENST00000352393 PHPT1Q9NRX4 125 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-202ENST00000352393 MID1O15344 667 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 RNGTTO60942 597 aaKnown RBP22.81■■□□□ 1.24
CPNE1-202ENST00000352393 AGR2O95994 175 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 SNRPD2P62316 118 aaKnown RBP22.81■■□□□ 1.24
CPNE1-202ENST00000352393 FGL2Q14314 439 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 BICRALQ6AI39 1079 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 TBX5Q99593 518 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 THAP7Q9BT49 309 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-202ENST00000352393 HCAR1Q9BXC0 346 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 DPH1Q9BZG8 443 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 FOLH1BQ9HBA9 442 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 THAP10Q9P2Z0 257 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-202ENST00000352393 CD53P19397 219 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 TBXA2RP21731 343 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 F8A1P23610 371 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 SHC1P29353 583 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 BTCP35070 178 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 TALDO1P37837 337 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 BTN3A2P78410 334 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 GALEQ14376 348 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 ARHGAP11BQ3KRB8 267 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 EIPR1Q53HC9 387 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 PRPF38BQ5VTL8 546 aaKnown RBP22.81■■□□□ 1.24
CPNE1-202ENST00000352393 WDR88Q6ZMY6 472 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 LRRC25Q8N386 305 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-202ENST00000352393 CRISPLD2Q9H0B8 497 aa22.81■■□□□ 1.24
CPNE1-202ENST00000352393 SIDT1Q9NXL6 827 aaKnown RBP22.81■■□□□ 1.24
CPNE1-202ENST00000352393 TBC1D3KA0A087X1G2 549 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 TBC1D3BA6NDS4 549 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 TBC1D3FA6NER0 549 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-202ENST00000352393 FUT1P19526 365 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 CMPK1P30085 196 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 MRPL28Q13084 256 aaKnown RBP22.8■■□□□ 1.24
CPNE1-202ENST00000352393 FAM78AQ5JUQ0 283 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 TBC1D3GQ6DHY5 549 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 SFXN4Q6P4A7 337 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 OR52L1Q8NGH7 329 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 OR5W2Q8NH69 310 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 NACC2Q96BF6 587 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 CACYBPQ9HB71 228 aaKnown RBP22.8■■□□□ 1.24
CPNE1-202ENST00000352393 INPP5EQ9NRR6 644 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 HSPB11Q9Y547 144 aa22.8■■□□□ 1.24
CPNE1-202ENST00000352393 A0A0G2JK05 382 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 DAPL1A0PJW8 107 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 TRAPPC13A5PLN9 417 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 THBS1P07996 1170 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 NPR2P20594 1047 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 MAKP20794 623 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 HTR2AP28223 471 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 DUSP8Q13202 625 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 CCDC85BQ15834 202 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-202ENST00000352393 ASB18Q6ZVZ8 466 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 RANBP3LQ86VV4 465 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-202ENST00000352393 LNX2Q8N448 690 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 SAMD12Q8N8I0 201 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 GAL3ST3Q96A11 431 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 HS6ST2Q96MM7 605 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 ENKD1Q9H0I2 346 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 SERGEFQ9UGK8 458 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 RASD1Q9Y272 281 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 LYPD3O95274 346 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 CEACAM5P06731 702 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 PITPNBP48739 271 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 DUSP5Q16690 384 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 FAM27D1Q5T7N8 215 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 VN1R4Q7Z5H5 301 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 OR2L13Q8N349 312 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 C9orf62Q8N4C0 152 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 DNAJC5GQ8N7S2 189 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 KCT2Q8NC54 265 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 TTC9Q92623 222 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 HYLS1Q96M11 299 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 ABCG5Q9H222 651 aa22.79■■□□□ 1.24
CPNE1-202ENST00000352393 SCN3AQ9NY46 2000 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 A0A0A6YYJ9 748 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 E9PI62 339 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 PLPP2O43688 288 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 CHP2O43745 196 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 POU2F2P09086 479 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 PRG2P13727 222 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 OR10A3P58181 314 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 SNRPNP63162 240 aaKnown RBP22.78■■□□□ 1.24
CPNE1-202ENST00000352393 TNFRSF17Q02223 184 aa22.78■■□□□ 1.24
CPNE1-202ENST00000352393 RPE65Q16518 533 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms