RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SPG21Q9NZD8 308 aa9.97□□□□□ -0.81
CAPN3-203ENST00000349748 DNAJB11Q9UBS4 358 aa9.97□□□□□ -0.81
CAPN3-203ENST00000349748 FBXW11Q9UKB1 542 aa9.97□□□□□ -0.81
CAPN3-203ENST00000349748 HTTP42858 3142 aa9.97□□□□□ -0.81
CAPN3-203ENST00000349748 A0A1W2PRB8 838 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 YY2O15391 372 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 NARSO43776 548 aaKnown RBP9.96□□□□□ -0.81
CAPN3-203ENST00000349748 CREBL2O60519 120 aaPredicted RBP9.96□□□□□ -0.81
CAPN3-203ENST00000349748 OTCP00480 354 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 EPXP11678 715 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 IFNGR1P15260 489 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 ARF4P18085 180 aaPredicted RBP9.96□□□□□ -0.81
CAPN3-203ENST00000349748 AGAP20933 346 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 GDNFP39905 211 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 CD96P40200 585 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 KIR3DL1P43629 444 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 STC1P52823 247 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 C21orf58P58505 322 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 CAP1Q01518 475 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 ALG11Q2TAA5 492 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 PLEKHN1Q494U1 663 aaPredicted RBP9.96□□□□□ -0.81
CAPN3-203ENST00000349748 BEX5Q5H9J7 111 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 SIRPB2Q5JXA9 342 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 RNLSQ5VYX0 342 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 GLDNQ6ZMI3 551 aaPredicted RBP9.96□□□□□ -0.81
CAPN3-203ENST00000349748 MON1AQ86VX9 555 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 OR8J1Q8NGP2 316 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 WFIKKN2Q8TEU8 576 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 SELENOMQ8WWX9 145 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 ACOT12Q8WYK0 555 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 ORAI3Q9BRQ5 295 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 COLEC11Q9BWP8 271 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 EBPLQ9BY08 206 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 ZSCAN32Q9NX65 697 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 ASF1AQ9Y294 204 aa9.96□□□□□ -0.81
CAPN3-203ENST00000349748 CARHSP1Q9Y2V2 147 aaKnown RBP9.96□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF197O14709 1029 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 MATN3O15232 486 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 C6orf47O95873 294 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 CD2P06729 351 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 RHOP08100 348 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 LIMS3P0CW19 117 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 LIMS4P0CW20 117 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 SDHAP31040 664 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 SCNN1AP37088 669 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 FLT3LGP49771 235 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 VEZF1Q14119 521 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 PTPRNQ16849 979 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF791Q3KP31 576 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 CDNFQ49AH0 187 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 XKR6Q5GH73 641 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 SLC22A10Q63ZE4 541 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 HBMQ6B0K9 141 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 CLEC9AQ6UXN8 241 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 LRRTM1Q86UE6 522 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF561Q8N587 486 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 OR9A2Q8NGT5 310 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 CD99L2Q8TCZ2 262 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 MRPS31Q92665 395 aaKnown RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 PKP4Q99569 1192 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 C2orf88Q9BSF0 95 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM185BQ9H7F4 350 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 NT5MQ9NPB1 228 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 LHX9Q9NQ69 397 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 VSX1Q9NZR4 365 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 A0A0C4DFX4 3053 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 A6NLC8 198 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 YJEFN3A6XGL0 299 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 IQCF5A8MTL0 148 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 H7C0S8 307 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 SNRPCP09234 159 aaKnown RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 OSMP13725 252 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 CCR7P32248 378 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 HCCSP53701 268 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 GAS1P54826 345 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 SEMG2Q02383 582 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 SURF2Q15527 256 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 TRAM1Q15629 374 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 SLC25A35Q3KQZ1 300 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 AFMIDQ63HM1 303 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 DPPA4Q7L190 304 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 TECPR1Q7Z6L1 1165 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 HS6ST3Q8IZP7 471 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 CPXM2Q8N436 756 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 FAM71CQ8NEG0 241 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 OR4D9Q8NGE8 314 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 HHIPL1Q96JK4 782 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF582Q96NG8 517 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 KLHL5Q96PQ7 755 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 FAIM2Q9BWQ8 316 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 ACPTQ9BZG2 426 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 TSPAN10Q9H1Z9 355 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 NOX3Q9HBY0 568 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 MEPEQ9NQ76 525 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 FAM212BQ9NTI7 297 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-203ENST00000349748 GJD2Q9UKL4 321 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 GPR52Q9Y2T5 361 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 FAM96BQ9Y3D0 163 aa9.96□□□□□ -0.82
CAPN3-203ENST00000349748 A0A0G2JMZ2 1700 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms