RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 CEACAM19Q7Z692 300 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 SERINC5Q86VE9 423 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 COMTD1Q86VU5 262 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 TMEM17Q86X19 198 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 EIF4E3Q8N5X7 224 aaKnown RBP15.17■□□□□ 0.02
MBD1-204ENST00000347968 HORMAD2Q8N7B1 307 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 ZNF485Q8NCK3 441 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 TCEAL4Q96EI5 215 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 LRRN3Q9H3W5 708 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 ASB8Q9H765 288 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 PRDM5Q9NQX1 630 aaPredicted RBP15.17■□□□□ 0.02
MBD1-204ENST00000347968 C1GALT1Q9NS00 363 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 C2orf42Q9NWW7 574 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 MOKQ9UQ07 419 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 RALGAPA2Q2PPJ7 1873 aa15.17■□□□□ 0.02
MBD1-204ENST00000347968 PRODHO43272 600 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 GIPP09681 153 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 DGKAP23743 735 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 NOS3P29474 1203 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 PSEN2P49810 448 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 CCR9P51686 369 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 LUMP51884 338 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 TBX4P57082 545 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 RAP2BP61225 183 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 CAP1Q01518 475 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 TSTA3Q13630 321 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 LRRC37A5PQ49AS3 106 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 MON1AQ86VX9 555 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 TBC1D19Q8N5T2 526 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 RBM14Q96PK6 669 aaKnown RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 CINPQ9BW66 212 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 RDH14Q9HBH5 336 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 OR2M5A3KFT3 312 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 GPR37O15354 613 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 SLC28A2O43868 658 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 FABP9Q0Z7S8 132 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 RAB40BQ12829 278 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 HABP2Q14520 560 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 B3GNTL1Q67FW5 361 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 TRIM40Q6P9F5 258 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 SMARCD3Q6STE5 483 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 CRTC1Q6UUV9 634 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 OR4K5Q8NGD3 323 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 C3orf49Q96BT1 292 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 AP5M1Q9H0R1 490 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 TMEM185BQ9H7F4 350 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 GPBP1L1Q9HC44 474 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 ACSS1Q9NUB1 689 aaPredicted RBP15.16■□□□□ 0.02
MBD1-204ENST00000347968 TMEM248Q9NWD8 314 aa15.16■□□□□ 0.02
MBD1-204ENST00000347968 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 SOCS6O14544 535 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 RNF13O43567 381 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 RGS9O75916 674 aaPredicted RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 THP07101 528 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 STXBP1P61764 594 aaKnown RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 IRF8Q02556 426 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 RTP2Q5QGT7 225 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 CDPF1Q6NVV7 123 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 SZRD1Q7Z422 152 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 C12orf40Q86WS4 652 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 OR52I2Q8NH67 350 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 ACOT12Q8WYK0 555 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 ECHDC3Q96DC8 303 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 AKAP7Q9P0M2 348 aaPredicted RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 PCDHB10Q9UN67 800 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 ASF1AQ9Y294 204 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 PCDHB9Q9Y5E1 797 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 CREBL2O60519 120 aaPredicted RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 EFCAB14O75071 495 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 KHDRBS3O75525 346 aaKnown RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 RLN1P04808 185 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 CTSHP09668 335 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 S100PP25815 95 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 NSG1P42857 185 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 TMEM71Q6P5X7 295 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 CXCL17Q6UXB2 119 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 SVBPQ8N300 66 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 KLHL36Q8N4N3 616 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 FUBP3Q96I24 572 aaKnown RBP eCLIP15.15■□□□□ 0.02
MBD1-204ENST00000347968 ABCG4Q9H172 646 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 OPN4Q9UHM6 478 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 MKI67P46013 3256 aaKnown RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 ZSWIM8A7E2V4 1837 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 A8MVJ9 347 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 ANKRD66B4E2M5 251 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 KCNAB3O43448 404 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 PRAMEF11O60813 436 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 UBXN7O94888 489 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 FARS2O95363 451 aaKnown RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 ATF1P18846 271 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 RPL3P39023 403 aaKnown RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 CASP6P55212 293 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 PTSQ03393 145 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 TIGD5Q53EQ6 642 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 UBE2R2Q712K3 238 aaPredicted RBP15.15■□□□□ 0.02
MBD1-204ENST00000347968 SPAG16Q8N0X2 631 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 IL17RCQ8NAC3 791 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 RELTQ969Z4 430 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 CHFRQ96EP1 664 aa15.15■□□□□ 0.02
MBD1-204ENST00000347968 IFT27Q9BW83 186 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms