RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 FAM69AQ5T7M9 428 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SMARCD3Q6STE5 483 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 RBM45Q8IUH3 476 aaKnown RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 GPR135Q8IZ08 494 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SAMD12Q8N8I0 201 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 ZFP41Q8N8Y5 198 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 TEX19Q8NA77 164 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 RPLP0P6Q8NHW5 317 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SPRYD4Q8WW59 207 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SLC5A11Q8WWX8 675 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 FAM131CQ96AQ9 280 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 LCORQ96JN0 433 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 CMTM3Q96MX0 182 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 GABRG3Q99928 467 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 ZNF649Q9BS31 505 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 PINK1Q9BXM7 581 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 ZNF436Q9C0F3 470 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 OR51B5Q9H339 312 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 AKAP7Q9P0M2 348 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 H2AFY2Q9P0M6 372 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 MBD1Q9UIS9 605 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 POMT2Q9UKY4 750 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 NPFFR2Q9Y5X5 522 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 CD8B2A6NJW9 211 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 LRRN3E7EW58 273 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 ATP6V1G2-DDX39BF2Z307 99 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 SYT5O00445 386 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 LANCL1O43813 399 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 TGM6O95932 706 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 EIF4EP06730 217 aaKnown RBP14.81□□□□□ -0.04
HMGA1-202ENST00000347617 CD8BP10966 210 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 NPPBP16860 134 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 THBS2P35442 1172 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 DRD3P35462 400 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 GPR1P46091 355 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 TRAM2Q15035 370 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 CST6Q15828 149 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 PRSS53Q2L4Q9 553 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 ZNF658BQ4V348 819 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-202ENST00000347617 BHLHB9Q6PI77 547 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 ADAMTSL4Q6UY14 1074 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 WASH2PQ6VEQ5 465 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 KRT74Q7RTS7 529 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 SLC9B2Q86UD5 537 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 KRT78Q8N1N4 520 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 MS4A15Q8N5U1 240 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 FAM71CQ8NEG0 241 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 OR10Z1Q8NGY1 313 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 PIGXQ8TBF5 258 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 SLC35G5Q96KT7 338 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 TREX2Q9BQ50 279 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-202ENST00000347617 TMEM121BQ9BXQ6 578 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-202ENST00000347617 LRRN3Q9H3W5 708 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 C8orf33Q9H7E9 229 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-202ENST00000347617 ABRACLQ9P1F3 81 aa14.81□□□□□ -0.04
HMGA1-202ENST00000347617 ZFR2Q9UPR6 939 aaKnown RBP14.81□□□□□ -0.04
HMGA1-202ENST00000347617 NAP1L6A6NFF2 107 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 TSPAN4O14817 238 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SSNA1O43805 119 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 PPM1BO75688 479 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 ACP5P13686 325 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 NTSR1P30989 418 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 KHKP50053 298 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 VASNQ6EMK4 673 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SFXN4Q6P4A7 337 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 TMEM81Q6P7N7 255 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 LYPD4Q6UWN0 246 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 ZNF480Q8WV37 535 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 AHCYL2Q96HN2 611 aaKnown RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 PELOQ9BRX2 385 aaKnown RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 TMPRSS13Q9BYE2 586 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SHARPINQ9H0F6 387 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 TRIM36Q9NQ86 728 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 BABAM2Q9NXR7 383 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 CD207Q9UJ71 328 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SCML1Q9UN30 329 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 ENTPD4Q9Y227 616 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 C2orf92A0A1B0GVN3 265 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 OR6C65A6NJZ3 312 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SURF4O15260 269 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 NDUFA2O43678 99 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 FZD7O75084 574 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 ACSM4P0C7M7 580 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SAGP10523 405 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 NR2F1P10589 423 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 GLULP15104 373 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 CXCL3P19876 107 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 PCBP4P57723 403 aaKnown RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 OPCMLQ14982 345 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 NHLRC3Q5JS37 347 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 AGBL4Q5VU57 503 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 ZNF776Q68DI1 518 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 TMEM220Q6QAJ8 160 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 TRMT11Q7Z4G4 463 aaKnown RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SPICQ8N5J4 248 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 CEP76Q8TAP6 659 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SUN3Q8TAQ9 357 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 YIPF5Q969M3 257 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 COX14Q96I36 57 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms