RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 MCHR1Q99705 422 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 C3orf14Q9HBI5 128 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 USP36Q9P275 1121 aaKnown RBP5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF443Q9Y2A4 671 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-201ENST00000347613 NOX1Q9Y5S8 564 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 THADAQ6YHU6 1953 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 A0A0G2JPF8 293 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 A0A1W2PPK0 400 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 MEIOCA2RUB1 952 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 HNRNPCL2B2RXH8 293 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 HNRNPCL3B7ZW38 293 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 MYL12BO14950 172 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 PRODHO43272 600 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 EMC8O43402 210 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 FOXS1O43638 330 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 MPZL2O60487 215 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 CCNKO75909 580 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 PAHP00439 452 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 HNRNPCL4P0DMR1 293 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 CHRNB1P11230 501 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 CXCR2P25025 360 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 KHKP50053 298 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 EMDP50402 254 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 TGM3Q08188 693 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 TPBGQ13641 420 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ERV3-1Q14264 604 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SHHQ15465 462 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 DEFB110Q30KQ9 67 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 RNLSQ5VYX0 342 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 TMEM64Q6YI46 380 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 TMPRSS11AQ6ZMR5 421 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF620Q6ZNG0 422 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 LRRC17Q8N6Y2 441 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 OR51G2Q8NGK0 314 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 GANCQ8TET4 914 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 HSD17B8Q92506 261 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 RAB7BQ96AH8 199 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SCARF2Q96GP6 870 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF764Q96H86 408 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-201ENST00000347613 LMF1Q96S06 567 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SARGQ9BW04 601 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 UBQLN3Q9H347 655 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ANKHQ9HCJ1 492 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 FLRT3Q9NZU0 649 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SEC14L4Q9UDX3 406 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 IQCMA0A1B0GVH7 501 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 GABRPO00591 440 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 BHLHE40O14503 412 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ALPPP05187 535 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 EIF2S1P05198 315 aaKnown RBP5.61□□□□□ -1.51
CLCN3-201ENST00000347613 CSNK2A2P19784 350 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-201ENST00000347613 C5AR1P21730 350 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 THBS2P35442 1172 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 DAB2P98082 770 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 GPR18Q14330 331 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 KRT33BQ14525 404 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 C3orf38Q5JPI3 329 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 OTPQ5XKR4 325 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 MTFR2Q6P444 385 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 LYPD8Q6UX82 237 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 OR4D9Q8NGE8 314 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 OR51L1Q8NGJ5 315 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 OR13C2Q8NGS9 318 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 OR10G6Q8NH81 332 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 FAM131CQ96AQ9 280 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 UPRTQ96BW1 309 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 DIRAS2Q96HU8 199 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 WDFY2Q96P53 400 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SECISBP2Q96T21 854 aaKnown RBP5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF559Q9BR84 538 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 ORAI3Q9BRQ5 295 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 CLDND1Q9NY35 253 aa5.61□□□□□ -1.51
CLCN3-201ENST00000347613 SAGE2PA6NJ88 616 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PRR32B1ATL7 298 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 IDSB3KWA1 339 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 GNB5O14775 395 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 POLR1CO15160 346 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PDE9AO76083 593 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SYPP08247 313 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 FOSL1P15407 271 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 UGT2B7P16662 529 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ELK1P19419 428 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TEAD1P28347 426 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SHC1P29353 583 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SOX6P35712 828 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SRP9P49458 86 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SMSP52788 366 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CDH11P55287 796 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RAB25P57735 213 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TRA2BP62995 288 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SLC25A35Q3KQZ1 300 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 MINDY4Q4G0A6 757 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 EXOSC6Q5RKV6 272 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CNIH2Q6PI25 160 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 FIP1L1Q6UN15 594 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RASSF6Q6ZTQ3 369 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ESPNLQ6ZVH7 1005 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TRILQ7L0X0 811 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SAMD14Q8IZD0 417 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 OR2L13Q8N349 312 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms