RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TUBA1CQ9BQE3 449 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 OR51I1Q9H343 314 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 TCF7L2Q9NQB0 619 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 POLE3Q9NRF9 147 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 FOXD3Q9UJU5 478 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 AP4B1Q9Y6B7 739 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 UQCRHLA0A096LP55 91 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 OR2M5A3KFT3 312 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 CCDC154A6NI56 674 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 CLCA1A8K7I4 914 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 TOXO94900 526 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 TMIGD3P0DMS9 266 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF17P17021 662 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 CTSSP25774 331 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 SSTR2P30874 369 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 CEACAM8P31997 349 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 EIF1P41567 113 aaKnown RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 SUMO3P55854 103 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 RPS26P62854 115 aaKnown RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 IRX1P78414 480 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 CDSNQ15517 529 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 GPR68Q15743 365 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 ARHGAP11BQ3KRB8 267 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 PDSS1Q5T2R2 415 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 OR2A2Q6IF42 318 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 EPGNQ6UW88 154 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 APOOLQ6UXV4 268 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 CHDHQ8NE62 594 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 TNIP2Q8NFZ5 429 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 OIT3Q8WWZ8 545 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 SMPDL3BQ92485 455 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 NEURL3Q96EH8 262 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 SDF2Q99470 211 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 NMUR2Q9GZQ4 415 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 FBXO34Q9NWN3 711 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 PAQR5Q9NXK6 330 aaPredicted RBP14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 DTNAQ9Y4J8 743 aa14.27□□□□□ -0.13
TSPAN4-201ENST00000346501 TMEM247A6NEH6 219 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 SEC14L5O43304 696 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 SCN2BO60939 215 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 IL18BPO95998 194 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 OR12D1P0DN82 309 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 MAGEA8P43361 318 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 ASCL1P50553 236 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 P2RX1P51575 399 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 POLR2JP52435 117 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 CLDN18P56856 261 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 PHC1P78364 1004 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 GPAT3Q53EU6 434 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 KLHL26Q53HC5 615 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 HSP90B2PQ58FF3 399 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 SAXO2Q658L1 398 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 TNFAIP8L2Q6P589 184 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 MSANTD1Q6ZTZ1 278 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 ZAR1Q86SH2 424 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 CLEC4FQ8N1N0 589 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 TMCO5AQ8N6Q1 288 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 TOR1AIP2Q8NFQ8 470 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 ITCHQ96J02 903 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 MARK4Q96L34 752 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 TEX37Q96LM6 180 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 MAGEB18Q96M61 343 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 OR52B2Q96RD2 323 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 CCDC28BQ9BUN5 200 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 PRRG4Q9BZD6 226 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 RTN4RQ9BZR6 473 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 ENKD1Q9H0I2 346 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 CACYBPQ9HB71 228 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 SDR39U1Q9NRG7 319 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 LIPT1Q9Y234 373 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF337Q9Y3M9 751 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 WDR45Q9Y484 360 aa14.26□□□□□ -0.13
TSPAN4-201ENST00000346501 SLC22A20A6NK97 555 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 C17orf51A8MQB3 221 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 C19orf84I3L1E1 186 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF264O43296 627 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 EIF4E2O60573 245 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 TNFRSF21O75509 655 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 UBL4AP11441 157 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 FCGR2AP12318 317 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 CCR4P51679 360 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 B3GALT5-AS1P59052 145 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 GNA13Q14344 377 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 C6orf10Q5SRN2 563 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 ARSKQ6UWY0 536 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 SEM1Q6ZVN7 128 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 KIF18BQ86Y91 864 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 GTPBP8Q8N3Z3 284 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 ARFGAP2Q8N6H7 521 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 UCN2Q96RP3 112 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 SFXN3Q9BWM7 321 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 SLCO1B3Q9NPD5 702 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 MED17Q9NVC6 651 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 KCNE3Q9Y6H6 103 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 ARHGAP21Q5T5U3 1957 aa14.25□□□□□ -0.13
TSPAN4-201ENST00000346501 NPIPA5A0A0B4J1W7 369 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 FAM234BA2RU67 622 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 C7orf72A4D263 438 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 GJE1A6NN92 205 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 EEF1E1-BLOC1S5C9J1V9 151 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms