RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 FBXL2Q9UKC9 423 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 PCDHB14Q9Y5E9 798 aa14.65□□□□□ -0.06
RAB5C-201ENST00000346213 PCNX1Q96RV3 2341 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 GTF3C1Q12789 2109 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 NINQ8N4C6 2090 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 TRGV5A0A0B4J1U4 118 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 PRSS44E7EML9 344 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 PRRG2O14669 202 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 ACOX3O15254 700 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 ACP2P11117 423 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 CYP4B1P13584 511 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 GDF1P27539 372 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 HPCAL1P37235 193 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 ADH7P40394 386 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 NRG3P56975 720 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 SLC10A1Q14973 349 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 LPCAT4Q643R3 524 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 OR5M10Q6IEU7 315 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 TMEM81Q6P7N7 255 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 NEIL3Q8TAT5 605 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 PIK3R3Q92569 461 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 COQ8BQ96D53 544 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 C16orf58Q96GQ5 468 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 TMEM41AQ96HV5 264 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 ZNF570Q96NI8 536 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 SECISBP2Q96T21 854 aaKnown RBP14.64□□□□□ -0.07
RAB5C-201ENST00000346213 PRPF18Q99633 342 aaKnown RBP14.64□□□□□ -0.07
RAB5C-201ENST00000346213 PKP2Q99959 881 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 CPPED1Q9BRF8 314 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-201ENST00000346213 OSBPL11Q9BXB4 747 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 EQTNQ9NQ60 294 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 CCM2LQ9NUG4 571 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-201ENST00000346213 GIMAP4Q9NUV9 329 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 FBXO34Q9NWN3 711 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 ATP6V1HQ9UI12 483 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 MAGEL2Q9UJ55 1249 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 BOKQ9UMX3 212 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-201ENST00000346213 MED12Q93074 2177 aa14.64□□□□□ -0.07
RAB5C-201ENST00000346213 APCP25054 2843 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 PRAMEF25A6NGN4 478 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 RFXANKO14593 260 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 TP53I11O14683 189 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 SNPHO15079 494 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 REM1O75628 298 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 UMPSP11172 480 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 NAGAP17050 411 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 PEX2P28328 305 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 NTSP30990 170 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 CRYZQ08257 329 aaKnown RBP14.63□□□□□ -0.07
RAB5C-201ENST00000346213 WIPI1Q5MNZ9 446 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-201ENST00000346213 TIGD3Q6B0B8 471 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 ANGPTL8Q6UXH0 198 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 APOOLQ6UXV4 268 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 NUP54Q7Z3B4 507 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 ANKRD46Q86W74 232 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 LIX1LQ8IVB5 337 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 TNIP2Q8NFZ5 429 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 PHF10Q8WUB8 498 aaKnown RBP14.63□□□□□ -0.07
RAB5C-201ENST00000346213 CANT1Q8WVQ1 401 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 PPCDCQ96CD2 204 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 CCDC115Q96NT0 180 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 COL21A1Q96P44 957 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 INPP5KQ9BT40 448 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 LMF2Q9BU23 707 aaKnown RBP14.63□□□□□ -0.07
RAB5C-201ENST00000346213 THUMPD3Q9BV44 507 aaKnown RBP14.63□□□□□ -0.07
RAB5C-201ENST00000346213 DUSP26Q9BV47 211 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 ACKR4Q9NPB9 350 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 SLC6A13Q9NSD5 602 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 DDX18Q9NVP1 670 aaKnown RBP14.63□□□□□ -0.07
RAB5C-201ENST00000346213 SH3BP4Q9P0V3 963 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 CFL2Q9Y281 166 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 DNAJC13O75165 2243 aa14.63□□□□□ -0.07
RAB5C-201ENST00000346213 TCRBV5S2A0A599 114 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 DHRS12A0PJE2 317 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 OR6C70A6NIJ9 312 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 SUSD5O60279 629 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 TOXO94900 526 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 HPNP05981 417 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 GPIP06744 558 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 RPL3P39023 403 aaKnown RBP14.62□□□□□ -0.07
RAB5C-201ENST00000346213 CDKN2CP42773 168 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 MAN2A2P49641 1150 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 TMED10P49755 219 aaKnown RBP14.62□□□□□ -0.07
RAB5C-201ENST00000346213 DCAF7P61962 342 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 LRRC74AQ0VAA2 488 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 GTDC1Q4AE62 458 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 CPTPQ5TA50 214 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 ANXA8L1Q5VT79 327 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 GLYATQ6IB77 296 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 ZNF585AQ6P3V2 769 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 IZUMO2Q6UXV1 221 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 DNAJC14Q6Y2X3 702 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-201ENST00000346213 YRDCQ86U90 279 aaKnown RBP14.62□□□□□ -0.07
RAB5C-201ENST00000346213 SAMD14Q8IZD0 417 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-201ENST00000346213 OR10A6Q8NH74 314 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 UCK2Q9BZX2 261 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 IKZF5Q9H5V7 419 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 CXorf36Q9H7Y0 433 aa14.62□□□□□ -0.07
RAB5C-201ENST00000346213 KAT8Q9H7Z6 458 aaKnown RBP14.62□□□□□ -0.07
RAB5C-201ENST00000346213 METTL7AQ9H8H3 244 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms