RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 FAM230AA0A1W2PPH8 454 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 CCL16O15467 120 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 JUNDP17535 347 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 GIPRP48546 466 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 UBE2KP61086 200 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 KDM4DQ6B0I6 523 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 LEG1Q6P5S2 330 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF280BQ86YH2 543 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 DCAF4L2Q8NA75 395 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 C16orf58Q96GQ5 468 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SLC2A11Q9BYW1 496 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 CBY1Q9Y3M2 126 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SNX11Q9Y5W9 270 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 FRS3O43559 492 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SRP9P49458 86 aaKnown RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 DECR1Q16698 335 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 C3orf38Q5JPI3 329 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SAXO2Q658L1 398 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 OR10K2Q6IF99 312 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SFXN4Q6P4A7 337 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 UNC5DQ6UXZ4 953 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 CD163Q86VB7 1156 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 OR4M1Q8NGD0 313 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 HCAR2Q8TDS4 363 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 TM9SF4Q92544 642 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 HAS2Q92819 552 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 ZIC5Q96T25 663 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 PIGMQ9H3S5 423 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 LTB4R2Q9NPC1 389 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 C19orf12Q9NSK7 152 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 ZFP57Q9NU63 452 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 LUZP4Q9P127 313 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 C5AR2Q9P296 337 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 CLEC2DQ9UHP7 191 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SLC7A7Q9UM01 511 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 HMX2A2RU54 273 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 K7EPK0 472 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 GPR143P51810 404 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 TAS2R38P59533 333 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 P4HA3Q7Z4N8 544 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 FAM71E2Q8N5Q1 922 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF417Q8TAU3 575 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 GLYATL2Q8WU03 294 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 GLYATL1Q969I3 302 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SLC25A46Q96AG3 418 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 FZD3Q9NPG1 666 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 UBE2J1Q9Y385 318 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 NUMBLQ9Y6R0 609 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 KIF1AQ12756 1690 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 GABRR3A8MPY1 467 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 FAM171A2A8MVW0 826 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 PPP1R2P9O14990 202 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 CASC3O15234 703 aaKnown RBP11.41□□□□□ -0.58
COL12A1-202ENST00000345356 RAD51DO75771 328 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 ARHGAP1Q07960 439 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 HYAL2Q12891 473 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 MEF2DQ14814 521 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 KDELC1Q6UW63 502 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 PRRG4Q9BZD6 226 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 CROCCQ5TZA2 2017 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 TRBV4-1A0A0J9YWV2 114 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 LGALS8O00214 317 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 RDH16O75452 317 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 S100A8P05109 93 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SHC1P29353 583 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 AKR1C2P52895 323 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 TAS2R19P59542 299 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 CSNK2A1P68400 391 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-202ENST00000345356 AKR1C1Q04828 323 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 TAZQ16635 292 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 AMZ1Q400G9 498 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 ADAM5Q6NVV9 412 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SLC22A25Q6T423 547 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 CSNK2A3Q8NEV1 391 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 OR2A12Q8NGT7 310 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 OR10R2Q8NGX6 335 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 DUS3LQ96G46 650 aaKnown RBP11.41□□□□□ -0.58
COL12A1-202ENST00000345356 ACKR4Q9NPB9 350 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SLCO3A1Q9UIG8 710 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 B3GALT1Q9Y5Z6 326 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 TMEM82A0PJX8 343 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SLC9B1P1A6NJY1 282 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 GFRA2O00451 464 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SRPX2O60687 465 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-202ENST00000345356 RAB40ALP0C0E4 278 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SLC1A3P43003 542 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 IGSF11Q5DX21 431 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 MLIPQ5VWP3 458 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 NXPE4Q6UWF7 544 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 ADGRF3Q8IZF5 1079 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 GATSQ8NAP1 163 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 RAB40AQ8WXH6 277 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 ALOXE3Q9BYJ1 711 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SPNS1Q9H2V7 528 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 DCDC2BA2VCK2 349 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 TO15178 435 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 GP1BBP13224 206 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 NME2P22392 152 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms