RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SLC18B1Q6NT16 456 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 LEG1Q6P5S2 330 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 SHFQ7M4L6 423 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 NAXDQ8IW45 347 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 FRS2Q8WU20 508 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 LINC00615Q96LM1 132 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 TEX13CA0A0J9YWL9 993 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 B3GALT4O96024 378 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 GCAP28676 217 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 ZNF829Q3KNS6 432 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 LCORQ96JN0 433 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 LRRC3BQ96PB8 259 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 PHF12Q96QT6 1004 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 TMPRSS11EQ9UL52 423 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 ZNF432O94892 652 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 GLT8D1Q68CQ7 371 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 PLET1Q6UQ28 207 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 TMEM239Q8WW34 195 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 BORCS5Q969J3 196 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 C8orf44Q96CB5 159 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 CCDC115Q96NT0 180 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 HDHD5Q9BXW7 423 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 CHST8Q9H2A9 424 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 ZNF160Q9HCG1 818 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC17A4Q9Y2C5 497 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 EIF3IQ13347 325 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 TSTQ16762 297 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 VWA2Q5GFL6 755 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 TMEM53Q6P2H8 277 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 C6orf89Q6UWU4 347 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 VTCN1Q7Z7D3 282 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 ING3Q9NXR8 418 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 NME4O00746 187 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 STPG1Q5TH74 334 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 TRIM46Q7Z4K8 759 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 STT3BQ8TCJ2 826 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 SGCDQ92629 289 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 ARL5BQ96KC2 179 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 FRMD6Q96NE9 622 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 CCDC86Q9H6F5 360 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 ZNF443Q9Y2A4 671 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 GFYI3L273 518 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 ACVR1BP36896 505 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 NXPH1P58417 271 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 ODF4Q2M2E3 257 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 OR8J2Q8NGG1 315 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 RBM24Q9BX46 236 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 RHBDL2Q9NX52 303 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 COMMD3Q9UBI1 195 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 WASF3Q9UPY6 502 aa15.34■□□□□ 0.05
SMARCA4-201ENST00000344626 FUT1P19526 365 aa15.33■□□□□ 0.05
SMARCA4-201ENST00000344626 MEP1AQ16819 746 aa15.33■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC35F3Q8IY50 421 aa15.33■□□□□ 0.05
SMARCA4-201ENST00000344626 TAAR9Q96RI9 348 aa15.33■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC6A5Q9Y345 797 aa15.33■□□□□ 0.05
SMARCA4-201ENST00000344626 CDH10Q9Y6N8 788 aa15.33■□□□□ 0.05
SMARCA4-201ENST00000344626 M0R3H8 397 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 MEN1O00255 615 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 ACOX3O15254 700 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 MOSPD3O75425 235 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 GMFBP60983 142 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 EEF1A1P68104 462 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 NPRL3Q12980 569 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 KCNAB2Q13303 367 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 OR7A5Q15622 319 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 C5orf46Q6UWT4 87 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 UBE2Q1Q7Z7E8 422 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 OR1N1Q8NGS0 311 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 PRRC1Q96M27 445 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 SCGB3A2Q96PL1 93 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 TUBA8Q9NY65 449 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF222Q9UK12 451 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 PCDHGA7Q9Y5G6 932 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 FABP12A6NFH5 140 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 A6NLC8 198 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 NR4A1P22736 598 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 FZD2Q14332 565 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 ABCA11PQ4W5N1 156 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 PIGGQ5H8A4 983 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 FAM83HQ6ZRV2 1179 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 C3orf30Q96M34 536 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 WDR83Q9BRX9 315 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 CDCP1Q9H5V8 836 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 SCN1AP35498 2009 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 H3BUI4 141 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 STK17BO94768 372 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 MAOAP21397 527 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 NAA10P41227 235 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 HDAC2Q92769 488 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 ISL2Q96A47 359 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 HAVCR1Q96D42 359 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF597Q96LX8 424 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 ING4Q9UNL4 249 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 DHDHQ9UQ10 334 aa15.33■□□□□ 0.04
SMARCA4-201ENST00000344626 EME2A4GXA9 379 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 LILRA5A6NI73 299 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 CENPBD1B2RD01 187 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 TAPBPO15533 448 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF264O43296 627 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 RAD1O60671 282 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms