RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 H3BUI4 141 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 L7N2F9 121 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 SLC2A10O95528 541 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ALDOBP05062 364 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 URODP06132 367 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 LPLP06858 475 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ASGR1P07306 291 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 CKBP12277 381 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ATF1P18846 271 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 RAB3AP20336 220 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 RAB3BP20337 219 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 GDNFP39905 211 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 BUD31P41223 144 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 CAPZA2P47755 286 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 CCR9P51686 369 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 POLR2LP62875 67 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ARL9Q6T311 187 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 LCTLQ6UWM7 567 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 OLIG3Q7RTU3 272 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 CEACAM19Q7Z692 300 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 CPOQ8IVL8 374 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 OR6V1Q8N148 313 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 SLC44A3Q8N4M1 653 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ANKRD53Q8N9V6 530 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 TTLQ8NG68 377 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 SFXN5Q8TD22 340 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 SORCS1Q8WY21 1168 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 CNOT9Q92600 299 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 KAT2AQ92830 837 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 DACT3Q96B18 629 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF689Q96CS4 500 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 IFT27Q9BW83 186 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 SLC7A5P2Q9GIP4 190 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 TSPAN11A1L157 253 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 GSAPA4D1B5 854 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ABCD4O14678 606 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 RGS11O94810 467 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 LDOC1O95751 146 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 MT-ND5P03915 603 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 GALTP07902 379 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 IFNGR1P15260 489 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 GJA1P17302 382 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 PSMB1P20618 241 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 OR1D2P34982 312 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ATP6V1E1P36543 226 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ANXA11P50995 505 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 MLLT1Q03111 559 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ZMYND11Q15326 602 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 PRAMEF14Q5SWL7 426 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 PRAMEF13Q5VWM6 474 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 OLFML2AQ68BL7 652 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 TPGS2Q68CL5 300 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 DMKNQ6E0U4 476 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 GDPD4Q6W3E5 623 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 MEPCEQ7L2J0 689 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 LMNTD1Q8N9Z9 388 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 BRIX1Q8TDN6 353 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 EXOSC8Q96B26 276 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF416Q9BWM5 594 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 GLIPR2Q9H4G4 154 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 HRASLSQ9HDD0 168 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 H2AFY2Q9P0M6 372 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 C5AR2Q9P296 337 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 MGAT4CQ9UBM8 478 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 SPATA2Q9UM82 520 aa9.01□□□□□ -0.97
HOXA1-201ENST00000343060 PCDHGA9Q9Y5G4 932 aaKnown RBP9.01□□□□□ -0.97
HOXA1-201ENST00000343060 UTRNP46939 3433 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 HMSDA8MTL9 139 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 E9PI62 339 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 RFXAPO00287 272 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 RTCAO00442 366 aaKnown RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 PGRMC2O15173 223 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 TMPRSS11DO60235 418 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 SUSD5O60279 629 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 SELENOFO60613 162 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 LILRB5O75023 590 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 NTN1O95631 604 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 IL5P05113 134 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 EPXP11678 715 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 HOXB1P14653 301 aaPredicted RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 RPL17P18621 184 aaKnown RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 NDUFV2P19404 249 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 POU3F2P20265 443 aaPredicted RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 DRD5P21918 477 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 PAICSP22234 425 aaKnown RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 NFYAP23511 347 aaPredicted RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 ATP5A1P25705 553 aaKnown RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 VEGFCP49767 419 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 GATMP50440 423 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 FLI1Q01543 452 aaPredicted RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 TMEM115Q12893 351 aaPredicted RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 HLXQ14774 488 aaPredicted RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF169Q14929 603 aaPredicted RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 ETFDHQ16134 617 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 RNASE12Q5GAN4 147 aaKnown RBP9□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF697Q5TEC3 545 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 TMEM220Q6QAJ8 160 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 MBOAT2Q6ZWT7 520 aa9□□□□□ -0.97
HOXA1-201ENST00000343060 KCT2Q8NC54 265 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms