RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 IL17RDQ8NFM7 739 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 ALKQ9UM73 1620 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 H3BMQ9 156 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 SRPX2O60687 465 aaPredicted RBP16.73■□□□□ 0.27
SMAD4-201ENST00000342988 ADRB2P07550 413 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 RNH1P13489 461 aaKnown RBP16.73■□□□□ 0.27
SMAD4-201ENST00000342988 JUPP14923 745 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 USF1P22415 310 aaPredicted RBP16.73■□□□□ 0.27
SMAD4-201ENST00000342988 ELK4P28324 431 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 HOXD12P35452 270 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 SLC18A1P54219 525 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 OR4D2P58180 307 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 RAP2BP61225 183 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 GOLGA7Q7Z5G4 137 aa16.73■□□□□ 0.27
SMAD4-201ENST00000342988 MMP3P08254 477 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 LACC1Q8IV20 430 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 KCNRGQ8N5I3 272 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 CELF5Q8N6W0 485 aaKnown RBP16.72■□□□□ 0.27
SMAD4-201ENST00000342988 LINC01599Q8WXQ3 324 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 OR5P2Q8WZ92 322 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 KIAA1191Q96A73 305 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 RASD1Q9Y272 281 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 ENSAO43768 121 aaKnown RBP16.72■□□□□ 0.27
SMAD4-201ENST00000342988 DLX5P56178 289 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 NPRL3Q12980 569 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 LEG1Q6P5S2 330 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 IL31RAQ8NI17 732 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 MGLLQ99685 303 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 ITGB2P05107 769 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 INHAP05111 366 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 ARL2P36404 184 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 SLC22A6Q4U2R8 563 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 TRMT10BQ6PF06 316 aaKnown RBP16.72■□□□□ 0.27
SMAD4-201ENST00000342988 XKR5Q6UX68 686 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 MCATQ8IVS2 390 aaKnown RBP16.72■□□□□ 0.27
SMAD4-201ENST00000342988 OR11L1Q8NGX0 322 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF317Q96PQ6 595 aaPredicted RBP16.72■□□□□ 0.27
SMAD4-201ENST00000342988 SEC22CQ9BRL7 303 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 ARL2-SNX15V9GYD0 113 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 TO15178 435 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 SCO2O43819 266 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 AADACP22760 399 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 TAGLN2P37802 199 aaKnown RBP16.72■□□□□ 0.27
SMAD4-201ENST00000342988 CHRDL1Q9BU40 450 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 TLR9Q9NR96 1032 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 NPIPA5A0A0B4J1W7 369 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 FBXL4Q9UKA2 621 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 ABCC3O15438 1527 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 TUSC2O75896 110 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 GALTP07902 379 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 THBS1P07996 1170 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 FOLR1P15328 257 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 PPP3CBP16298 524 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 CHRNEQ04844 493 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 IRF4Q15306 451 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 ARHGAP11BQ3KRB8 267 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 MKRN2Q9H000 416 aaKnown RBP16.72■□□□□ 0.27
SMAD4-201ENST00000342988 SLC22A11Q9NSA0 550 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 OR6C2Q9NZP2 312 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 SURF4O15260 269 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 PIGWQ7Z7B1 504 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
SMAD4-201ENST00000342988 TRAV18A0A075B6X5 111 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 MANBAO00462 879 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 FAM189A1O60320 539 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 MRPS14O60783 128 aaKnown RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 GJA5P36382 358 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 FBXL16Q8N461 479 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 MAF1Q9H063 256 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 ABCA6Q8N139 1617 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 PPP5D1E7EU14 171 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 ADAM11O75078 769 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 CKMT2P17540 419 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 TPGS2Q68CL5 300 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 RELL2Q8NC24 303 aaPredicted RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 SYNPRQ8TBG9 265 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 RPL10LQ96L21 214 aaKnown RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 SMOXQ9NWM0 555 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 LYRM1O43325 122 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 DHRS4L1P0CG22 281 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 OR5W2Q8NH69 310 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 RBM24Q9BX46 236 aaKnown RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 MROH2AA6NES4 1674 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 SNRPD2P62316 118 aaKnown RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 ABHD17BQ5VST6 288 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 PRSS55Q6UWB4 352 aaPredicted RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 MRPL10Q7Z7H8 261 aaKnown RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 SERINC5Q86VE9 423 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 FAM185AQ8N0U4 392 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 GPR148Q8TDV2 347 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 TGIF2Q9GZN2 237 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 FBRSL1Q9HCM7 1045 aaKnown RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 TBX10O75333 385 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 PENKP01210 267 aaPredicted RBP16.71■□□□□ 0.27
SMAD4-201ENST00000342988 G0S2P27469 103 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 GDPGP1Q6ZNW5 385 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 PTTG3PQ9NZH4 202 aa16.71■□□□□ 0.27
SMAD4-201ENST00000342988 DNAJB13P59910 316 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 IRF9Q00978 393 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms