RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 RABEPKQ7Z6M1 372 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 LSRQ86X29 649 aaPredicted RBP18.47■□□□□ 0.55
RTN1-202ENST00000342503 GRAMD2AQ8IUY3 354 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 COG8Q96MW5 612 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 ZNF559Q9BR84 538 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 OR8D2Q9GZM6 311 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 DNAJB12Q9NXW2 375 aaKnown RBP18.47■□□□□ 0.55
RTN1-202ENST00000342503 SELENONQ9NZV5 590 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 CLCA3PQ9Y6N3 262 aa18.47■□□□□ 0.55
RTN1-202ENST00000342503 ENTPD6O75354 484 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 DDAH2O95865 285 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 GPR4P46093 362 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 GIPRP48546 466 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 PSMD4P55036 377 aaKnown RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 MVKQ03426 396 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 FGFBP1Q14512 234 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 ELAVL1Q15717 326 aaKnown RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 RHBDD2Q6NTF9 364 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 ACSM5Q6NUN0 579 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 SLC23A3Q6PIS1 610 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 WDR88Q6ZMY6 472 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 RASSF6Q6ZTQ3 369 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 LAPTM4BQ86VI4 370 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 ERI1Q8IV48 349 aaKnown RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 GALNT15Q8N3T1 639 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 B3GNT7Q8NFL0 401 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 SLC2A12Q8TD20 617 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 ZNF721Q8TF20 911 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 TRUB1Q8WWH5 349 aaKnown RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 SLC46A1Q96NT5 459 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 VN1R1Q9GZP7 353 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 SLC25A19Q9HC21 320 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 SLC22A11Q9NSA0 550 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 C14orf105Q9NVL8 296 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 TVP23BQ9NYZ1 205 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 WARS2Q9UGM6 360 aaKnown RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 KLF4O43474 513 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 NOL3O60936 208 aaKnown RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 ATE1O95260 518 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 CKMT1AP12532 417 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 FPR3P25089 353 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 C21orf33P30042 268 aaPredicted RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 RORAP35398 523 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 STAT5AP42229 794 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 TMBIM6P55061 237 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 DAB2P98082 770 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 NSDHLQ15738 373 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 LPAL2Q16609 132 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.46■□□□□ 0.55
RTN1-202ENST00000342503 TCEANCQ8N8B7 351 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 POGLUT1Q8NBL1 392 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 C7orf57Q8NEG2 295 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 OR8D4Q8NGM9 314 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 TEX47Q8TBZ9 253 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 RNF217Q8TC41 542 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 LMF1Q96S06 567 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 GTPBP2Q9BX10 602 aaKnown RBP18.46■□□□□ 0.55
RTN1-202ENST00000342503 TMEM27Q9HBJ8 222 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 CTSFQ9UBX1 484 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 MKL2Q9ULH7 1088 aa18.46■□□□□ 0.55
RTN1-202ENST00000342503 TIAF1O95411 115 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 IGKV3-11P04433 115 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 STSP08842 583 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 SMSP52788 366 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 TMEM201Q5SNT2 666 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 PRR23CQ6ZRP0 262 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 STX19Q8N4C7 294 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 OR8J1Q8NGP2 316 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 NUDT9Q9BW91 350 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 FUNDC2Q9BWH2 189 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 DNAJC27Q9NZQ0 273 aa18.45■□□□□ 0.54
RTN1-202ENST00000342503 ZNF223Q9UK11 482 aaPredicted RBP18.45■□□□□ 0.54
RTN1-202ENST00000342503 PRKYO43930 277 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 ADAM11O75078 769 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 ACVR2AP27037 513 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 ACAA2P42765 397 aaKnown RBP18.44■□□□□ 0.54
RTN1-202ENST00000342503 PPICP45877 212 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 PCYT1AP49585 367 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 ST3GAL4Q11206 333 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 ZSWIM7Q19AV6 140 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 SYT6Q5T7P8 510 aaPredicted RBP18.44■□□□□ 0.54
RTN1-202ENST00000342503 ZNF613Q6PF04 617 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 SLC38A9Q8NBW4 561 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 OR4C3Q8NH37 302 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 GRHL3Q8TE85 626 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 TMEM239Q8WW34 195 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 EFHD2Q96C19 240 aaPredicted RBP18.44■□□□□ 0.54
RTN1-202ENST00000342503 Q96MT0 163 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 POLDIP3Q9BY77 421 aaKnown RBP18.44■□□□□ 0.54
RTN1-202ENST00000342503 NXF5Q9H1B4 397 aaKnown RBP18.44■□□□□ 0.54
RTN1-202ENST00000342503 KRCC1Q9NPI7 259 aaPredicted RBP18.44■□□□□ 0.54
RTN1-202ENST00000342503 FLRT3Q9NZU0 649 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 RARRES3Q9UL19 164 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 CFL2Q9Y281 166 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 VCANP13611 3396 aa18.44■□□□□ 0.54
RTN1-202ENST00000342503 EFCAB10A6NFE3 127 aa18.43■□□□□ 0.54
RTN1-202ENST00000342503 SCRG1O75711 98 aa18.43■□□□□ 0.54
RTN1-202ENST00000342503 LCKP06239 509 aa18.43■□□□□ 0.54
RTN1-202ENST00000342503 SYPP08247 313 aa18.43■□□□□ 0.54
RTN1-202ENST00000342503 SH3BGRP55822 239 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms