RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NDUFAF6Q330K2 333 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 AGAP7PQ5VUJ5 663 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 MARCH3Q86UD3 253 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 RBM45Q8IUH3 476 aaKnown RBP19.7■□□□□ 0.74
TPM1-204ENST00000334895 DND1Q8IYX4 353 aaKnown RBP19.7■□□□□ 0.74
TPM1-204ENST00000334895 CNOT9Q92600 299 aaKnown RBP19.7■□□□□ 0.74
TPM1-204ENST00000334895 PROX1Q92786 737 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 POP5Q969H6 163 aaKnown RBP19.7■□□□□ 0.74
TPM1-204ENST00000334895 AGAP4Q96P64 663 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 TRIM45Q9H8W5 580 aaPredicted RBP19.7■□□□□ 0.74
TPM1-204ENST00000334895 CACYBPQ9HB71 228 aaKnown RBP19.7■□□□□ 0.74
TPM1-204ENST00000334895 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.7■□□□□ 0.74
TPM1-204ENST00000334895 HPF1Q9NWY4 346 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 ABCG2Q9UNQ0 655 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 EML6Q6ZMW3 1958 aa19.7■□□□□ 0.74
TPM1-204ENST00000334895 A0A1W2PQD3 144 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 OIP5O43482 229 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 FKBP6O75344 327 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 F10P00742 488 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 RAP2AP10114 183 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 HPGDP15428 266 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 ADH7P40394 386 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 MAGEA2P43356 314 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 GAS1P54826 345 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 TMPRSS3P57727 454 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 CHRNB3Q05901 458 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 FAM98BQ52LJ0 330 aaKnown RBP19.69■□□□□ 0.74
TPM1-204ENST00000334895 TBCELQ5QJ74 424 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 C19orf48Q6RUI8 117 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 ISLR2Q6UXK2 745 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 MDGA2Q7Z553 956 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 CARM1Q86X55 608 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 FAM71CQ8NEG0 241 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 GEMIN6Q8WXD5 167 aaKnown RBP19.69■□□□□ 0.74
TPM1-204ENST00000334895 CHID1Q9BWS9 393 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 DNAJB12Q9NXW2 375 aaKnown RBP19.69■□□□□ 0.74
TPM1-204ENST00000334895 AP4S1Q9Y587 144 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 CACNA1BQ00975 2339 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 SCO2O43819 266 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 MGRN1O60291 552 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 SEMA7AO75326 666 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 WDPCPO95876 746 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 CCL3P10147 92 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 CD96P40200 585 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 TUBA3CQ13748 450 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 NPTX1Q15818 432 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 EIPR1Q53HC9 387 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 TUBA3EQ6PEY2 450 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 CMIPQ8IY22 773 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 OR6T1Q8NGN1 323 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 VANGL1Q8TAA9 524 aaPredicted RBP19.69■□□□□ 0.74
TPM1-204ENST00000334895 PAQR8Q8TEZ7 354 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 STMN2Q93045 179 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 ARSGQ96EG1 525 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 TBL1XR1Q9BZK7 514 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 AMBRA1Q9C0C7 1298 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 GALNT9Q9HCQ5 603 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 IL1RAPQ9NPH3 570 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 ARMC1Q9NVT9 282 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 PLA2G3Q9NZ20 509 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 CNOT11Q9UKZ1 510 aaKnown RBP19.69■□□□□ 0.74
TPM1-204ENST00000334895 CNTRLQ7Z7A1 2325 aa19.69■□□□□ 0.74
TPM1-204ENST00000334895 MGAQ8IWI9 3026 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 hCG_2039718K7EN88 272 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 TP53I11O14683 189 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 ADAM11O75078 769 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 CASP3P42574 277 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 CYB561P49447 251 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 UCNP55089 124 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 CXADRP78310 365 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 MFAP5Q13361 173 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 ZFP1Q6P2D0 407 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 AAGABQ6PD74 315 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 GRAMD2AQ8IUY3 354 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 GPALPP1Q8IXQ4 340 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 CYP4Z2PQ8N1L4 340 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 PHOSPHO1Q8TCT1 267 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 NTNG2Q96CW9 530 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 SECISBP2Q96T21 854 aaKnown RBP19.68■□□□□ 0.74
TPM1-204ENST00000334895 PROK2Q9HC23 129 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 HRH3Q9Y5N1 445 aa19.68■□□□□ 0.74
TPM1-204ENST00000334895 B4DXG7 233 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 TPST2O60704 377 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 TIPRLO75663 272 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 ANGPTL1O95841 491 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 CSTAP01040 98 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 PRG2P13727 222 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 ZNF136P52737 540 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 KCNC4Q03721 635 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 TMEM81Q6P7N7 255 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 CBLN3Q6UW01 205 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 RTL4Q6ZR62 310 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 TSPYL5Q86VY4 417 aaPredicted RBP19.67■□□□□ 0.74
TPM1-204ENST00000334895 SGCZQ96LD1 299 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 NDUFAF4Q9P032 175 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 ABI3Q9P2A4 366 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 SLC35A3Q9Y2D2 325 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 HEATR5AQ86XA9 2040 aa19.67■□□□□ 0.74
TPM1-204ENST00000334895 C2orf72A6NCS6 295 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 H0Y3Z8 333 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms