RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 GGT3PA6NGU5 568 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 I6L893 689 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ECH1Q13011 328 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF791Q3KP31 576 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 XKR5Q6UX68 686 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 TMPRSS12Q86WS5 348 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 SLITRK4Q8IW52 837 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 IFI44Q8TCB0 444 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 DUSP19Q8WTR2 217 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 FER1L6-AS2Q96M78 137 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 WDR83Q9BRX9 315 aaKnown RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 PLA2G2FQ9BZM2 168 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ARRDC1-AS1Q9H2J1 176 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 GORASP2Q9H8Y8 452 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 TBC1D24Q9ULP9 559 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 PCDHGB6Q9Y5F9 930 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 HSPE1-MOB4S4R3N1 261 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF264O43296 627 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 DAP3P51398 398 aaKnown RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 TRAM1Q15629 374 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 NKAIN1Q4KMZ8 207 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 MRPL2Q5T653 305 aaKnown RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 CD300LGQ6UXG3 332 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ZMYND19Q96E35 227 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 BORCS8Q96FH0 119 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 MMACHCQ9Y4U1 282 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 PHYHO14832 338 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ADH7P40394 386 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 KCNAB1Q14722 419 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 UGT8Q16880 541 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 AKIRIN2Q53H80 203 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ENTPD8Q5MY95 495 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 THOC7Q6I9Y2 204 aaKnown RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 FAM83HQ6ZRV2 1179 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-201ENST00000334490 CBLL1Q75N03 491 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 SAMD12Q8N8I0 201 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF565Q8N9K5 539 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 TWSG1Q9GZX9 223 aa14.05□□□□□ -0.16
C9orf47-201ENST00000334490 TEX13CA0A0J9YWL9 993 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 C5orf51A6NDU8 294 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 A6NIZ1 184 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 METTL12A8MUP2 240 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 GFYI3L273 518 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SLC35E2P0CK97 266 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 MTHFD2P13995 350 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 CPOXP36551 454 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SSR4P51571 173 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 RAP1BP61224 184 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 RAP1AP62834 184 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 ERVK-25P63136 954 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SELPLGQ14242 412 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SMAD2Q15796 467 aaKnown RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF829Q3KNS6 432 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 ZFP69Q49AA0 526 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 Q7L0L9 218 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 RETREG3Q86VR2 466 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 CNEP1R1Q8N9A8 125 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF548Q8NEK5 533 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SPRYD4Q8WW59 207 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SLC23A2Q9UGH3 650 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 TARM1B6A8C7 271 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 G3V3Y1 287 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 H0YJX3 145 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SLC1A7O00341 560 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 MBTPS2O43462 519 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 FZD6O60353 706 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 MAOAP21397 527 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 OR1Q1Q15612 314 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 STK11Q15831 433 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 TUBA3EQ6PEY2 450 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 PAQR7Q86WK9 346 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 BOLLQ8N9W6 283 aaKnown RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 XIRP1Q702N8 1843 aaKnown RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 F10P00742 488 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 VAMP1P23763 118 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 CD1CP29017 333 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 IDUAP35475 653 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SLC48A1Q6P1K1 146 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 MMP21Q8N119 569 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 OR5T2Q8NGG2 359 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 CCDC107Q8WV48 283 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 ISL2Q96A47 359 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SCGB3A2Q96PL1 93 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 GLIPR2Q9H4G4 154 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 INIPQ9NRY2 104 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 WNT16Q9UBV4 365 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 MUTYHQ9UIF7 546 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 HMX2A2RU54 273 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 ERCC1P07992 297 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 CD79AP11912 226 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 ABOP16442 354 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 LIMS2Q7Z4I7 341 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SDR9C7Q8NEX9 313 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 HOXB13Q92826 284 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 LCORQ96JN0 433 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 HDHD5Q9BXW7 423 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 QRSL1Q9H0R6 528 aaKnown RBP14.04□□□□□ -0.16
C9orf47-201ENST00000334490 PRDM9Q9NQV7 894 aa14.04□□□□□ -0.16
C9orf47-201ENST00000334490 SH3D21A4FU49 640 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms