RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TRAV27A0A087WT01 109 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 TNFSF14O43557 240 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 PTTG1O95997 202 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 MRPL3P09001 348 aaKnown RBP17.58■□□□□ 0.4
RFTN1-201ENST00000334133 IMPDH2P12268 514 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 MAGEA8P43361 318 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 DEFA1P59665 94 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 DEFA3P59666 94 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 PLK5Q496M5 336 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 NXNL2Q5VZ03 156 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 FAM160A2Q8N612 972 aaPredicted RBP17.58■□□□□ 0.4
RFTN1-201ENST00000334133 OR13C2Q8NGS9 318 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 RIPOR3Q96MK2 946 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 KATNB1Q9BVA0 655 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 TTTY10Q9BZA0 68 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 IL21RQ9HBE5 538 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 H2AFY2Q9P0M6 372 aaPredicted RBP17.58■□□□□ 0.4
RFTN1-201ENST00000334133 SNTNA6NMZ2 147 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 CYR61O00622 381 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 SLC30A4O14863 429 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 STX11O75558 287 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 REM1O75628 298 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 OR5F1O95221 314 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 ST6GAL1P15907 406 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 STAT5AP42229 794 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 LRIT3Q3SXY7 679 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 FHL5Q5TD97 284 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 THSD4Q6ZMP0 1018 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 GDPGP1Q6ZNW5 385 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 GATAD2AQ86YP4 633 aa17.58■□□□□ 0.4
RFTN1-201ENST00000334133 METTL27Q8N6F8 245 aaPredicted RBP17.58■□□□□ 0.4
RFTN1-201ENST00000334133 BAHD1Q8TBE0 780 aaPredicted RBP17.58■□□□□ 0.4
RFTN1-201ENST00000334133 SHISA3A0PJX4 238 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 C2orf74A8MZ97 194 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 CASKO14936 926 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 KLF4O43474 513 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 HRO43593 1189 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 SAGP10523 405 aaPredicted RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ETV6P41212 452 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 MRGPREQ86SM8 312 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 RBM12BQ8IXT5 1001 aaKnown RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ZNF619Q8N2I2 560 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 CYB561A3Q8NBI2 242 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ARHGAP9Q9BRR9 750 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ZNF350Q9GZX5 532 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 OR51V1Q9H2C8 321 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 C2orf42Q9NWW7 574 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 HCN3Q9P1Z3 774 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 PTGFRNQ9P2B2 879 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 A0A1W2PQ09 198 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 TMEM129A0AVI4 362 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 B4DGG1 531 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ADAM11O75078 769 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 GPR75O95800 540 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 APOA1P02647 267 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 CLUP10909 449 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 BNC1Q01954 994 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 PLAURQ03405 335 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ZNF155Q12901 538 aaPredicted RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 DUSP8Q13202 625 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ARMC4Q5T2S8 1044 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 CXXC5Q7LFL8 322 aaKnown RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 ABI3BPQ7Z7G0 1075 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 AKAP14Q86UN6 197 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 RANBP3LQ86VV4 465 aaPredicted RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 GJD3Q8N144 294 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 Q8N9G6 341 aaPredicted RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 FANK1Q8TC84 345 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 CNOT9Q92600 299 aaKnown RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 SIDT1Q9NXL6 827 aaKnown RBP17.57■□□□□ 0.4
RFTN1-201ENST00000334133 NLGN3Q9NZ94 848 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 FBXL4Q9UKA2 621 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 SCML1Q9UN30 329 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 CDH10Q9Y6N8 788 aa17.57■□□□□ 0.4
RFTN1-201ENST00000334133 A8MV72 311 aaPredicted RBP17.56■□□□□ 0.4
RFTN1-201ENST00000334133 RFPL3O75679 317 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 GYPBP06028 91 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 RPS7P62081 194 aaKnown RBP17.56■□□□□ 0.4
RFTN1-201ENST00000334133 MAT1AQ00266 395 aaKnown RBP17.56■□□□□ 0.4
RFTN1-201ENST00000334133 PRICKLE4Q2TBC4 344 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 DNAJC5GQ8N7S2 189 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 DTX3Q8N9I9 347 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 AVL9Q8NBF6 648 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 OR52R1Q8NGF1 315 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 TMEM239Q8WW34 195 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 NTMQ9P121 344 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.56■□□□□ 0.4
RFTN1-201ENST00000334133 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.56■□□□□ 0.4
RFTN1-201ENST00000334133 NR4A2P43354 598 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 RNLSQ5VYX0 342 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 CA13Q8N1Q1 262 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 GHDCQ8N2G8 530 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 EXOSC1Q9Y3B2 195 aaKnown RBP17.56■□□□□ 0.4
RFTN1-201ENST00000334133 SEC16AO15027 2179 aa17.56■□□□□ 0.4
RFTN1-201ENST00000334133 A0A0A6YYC8 382 aaPredicted RBP17.55■□□□□ 0.4
RFTN1-201ENST00000334133 TRAPPC13A5PLN9 417 aa17.55■□□□□ 0.4
RFTN1-201ENST00000334133 FABP12A6NFH5 140 aa17.55■□□□□ 0.4
RFTN1-201ENST00000334133 UNC119BA6NIH7 251 aa17.55■□□□□ 0.4
RFTN1-201ENST00000334133 I3L1I5 382 aaPredicted RBP17.55■□□□□ 0.4
RFTN1-201ENST00000334133 OR10H2O60403 315 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms