RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 JMJD6Q6NYC1 403 aaPredicted RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 ISLR2Q6UXK2 745 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 ABHD17AQ96GS6 310 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 ZNF354BQ96LW1 612 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 ZNF71Q9NQZ8 489 aaPredicted RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 CTPS2Q9NRF8 586 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 HPF1Q9NWY4 346 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 LRFN1Q9P244 771 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 CNOT11Q9UKZ1 510 aaKnown RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 ZNF443Q9Y2A4 671 aaPredicted RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 NCKAP5O14513 1909 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 ENTPD5O75356 428 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 PABPC4LP0CB38 370 aaKnown RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 TCEA1P23193 301 aaKnown RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 CASP3P42574 277 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 PNLIPRP2P54317 469 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 GAS1P54826 345 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 EEF1A1P68104 462 aaKnown RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 VEZF1Q14119 521 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 FLOT2Q14254 428 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 OR1C1Q15619 314 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 COL28A1Q2UY09 1125 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 KLHL26Q53HC5 615 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 MRPL2Q5T653 305 aaKnown RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 C1orf146Q5VVC0 180 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 BORAQ6PGQ7 559 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 CCDC80Q76M96 950 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 VANGL1Q8TAA9 524 aaPredicted RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 MFRPQ9BY79 579 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 TLN1Q9Y490 2541 aaKnown RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 HEATR5AQ86XA9 2040 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 A0A0G2JPF8 293 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 HNRNPCL2B2RXH8 293 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 HNRNPCL3B7ZW38 293 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 DIRAS1O95057 198 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 UBTFL6P0CB48 400 aaPredicted RBP15.1■□□□□ 0.01
SHOX-201ENST00000334060 HNRNPCL4P0DMR1 293 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 PTNP21246 168 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 RANBP1P43487 201 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 YAP1P46937 504 aaKnown RBP15.1■□□□□ 0.01
SHOX-201ENST00000334060 ATP12AP54707 1039 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 PMP22Q01453 160 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 MFAP5Q13361 173 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 LSAMPQ13449 338 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 NPTX1Q15818 432 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 ZNF311Q5JNZ3 666 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 RNF220Q5VTB9 566 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 ERICH5Q6P6B1 374 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 DHFR2Q86XF0 187 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 BBS10Q8TAM1 723 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 SLCO4A1Q96BD0 722 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 VPS50Q96JG6 964 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 HSH2DQ96JZ2 352 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 SEPHS2Q99611 448 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 ACTR3BQ9P1U1 418 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 CARD8Q9Y2G2 431 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 PCDHGB3Q9Y5G1 929 aa15.1■□□□□ 0.01
SHOX-201ENST00000334060 J3KTA2 159 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 AP3D1O14617 1153 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 CYP7B1O75881 506 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 KRT20P35900 424 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 CYB561P49447 251 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 HLCSP50747 726 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 ANXA11P50995 505 aaKnown RBP15.09■□□□□ 0.01
SHOX-201ENST00000334060 TOMM34Q15785 309 aaPredicted RBP15.09■□□□□ 0.01
SHOX-201ENST00000334060 ZNF141Q15928 474 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 LCN8Q6JVE9 175 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 ARMC8Q8IUR7 673 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 SPPL2AQ8TCT8 520 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 RNF138Q8WVD3 245 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 G6PC3Q9BUM1 346 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 SPATA9Q9BWV2 254 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 MTHFD2LQ9H903 347 aaPredicted RBP15.09■□□□□ 0.01
SHOX-201ENST00000334060 DCAF13Q9NV06 445 aaKnown RBP15.09■□□□□ 0.01
SHOX-201ENST00000334060 SEC14L3Q9UDX4 400 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 FBXL2Q9UKC9 423 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 TP53TG5Q9Y2B4 290 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 SH3GLB1Q9Y371 365 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 PCDHGA10Q9Y5H3 936 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 KALRNO60229 2985 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 SHISA8B8ZZ34 492 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 ANGPTL1O95841 491 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 AGR2O95994 175 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 IL7RP16871 459 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 ZNF117Q03924 483 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 OPN5Q6U736 354 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 CBLL1Q75N03 491 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 PSD4Q8NDX1 1056 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 MDS2Q8NDY4 140 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 PAQR8Q8TEZ7 354 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 DUSP19Q8WTR2 217 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 SNRNP27Q8WVK2 155 aaKnown RBP15.09■□□□□ 0.01
SHOX-201ENST00000334060 CANT1Q8WVQ1 401 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 NSMCE2Q96MF7 247 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 SMAD5Q99717 465 aaKnown RBP15.09■□□□□ 0.01
SHOX-201ENST00000334060 GORASP2Q9H8Y8 452 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 MAGEL2Q9UJ55 1249 aa15.09■□□□□ 0.01
SHOX-201ENST00000334060 GNB5O14775 395 aa15.08■□□□□ 0
SHOX-201ENST00000334060 SLC25A12O75746 678 aa15.08■□□□□ 0
SHOX-201ENST00000334060 AK1P00568 194 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms