RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 QSOX1O00391 747 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 EIF1BO60739 113 aaKnown RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ADAMTS4O75173 837 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 RECKO95980 971 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 TIA1P31483 386 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 S100A11P31949 105 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 EIF1P41567 113 aaKnown RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 OR2B8PP59922 312 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 MTAPQ13126 283 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 PDZD11Q5EBL8 140 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 H3F3CQ6NXT2 135 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 KLBQ86Z14 1044 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 L3MBTL4Q8NA19 623 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 OR8J2Q8NGG1 315 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 OR52B4Q8NGK2 314 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 BBS10Q8TAM1 723 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 XAGE5Q8WWM1 108 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 REG4Q9BYZ8 158 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 PRO1933Q9H354 126 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 RRAGCQ9HB90 399 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ACER3Q9NUN7 267 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 NTMQ9P121 344 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 STOX2Q9P2F5 926 aaPredicted RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 IL3P08700 152 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 PRG2P13727 222 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 NPR2P20594 1047 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 CD79BP40259 229 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 SSTP61278 116 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 SLC3A1Q07837 685 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 CHAF1BQ13112 559 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 PIN1Q13526 163 aaPredicted RBP11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ACER2Q5QJU3 275 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 DCST1Q5T197 706 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 MED27Q6P2C8 311 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 IKBIPQ70UQ0 350 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 OVCH2Q7RTZ1 564 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 CLDN22Q8N7P3 220 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 OR14A16Q8NHC5 309 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 SCARB1Q8WTV0 552 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 NRTNQ99748 197 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 SEMA4CQ9C0C4 833 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 MFFQ9GZY8 342 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 ANKRD19PQ9H560 264 aa11.12□□□□□ -0.63
LIMK2-202ENST00000333611 SULT1C2O00338 296 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 TGM6O95932 706 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 EIF4EP06730 217 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 HOXB6P17509 224 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 PPIBP23284 216 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 SLC6A1P30531 599 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 SLC6A12P48065 614 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 MRPL58Q14197 206 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 OR2B11Q5JQS5 317 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 TMEM220Q6QAJ8 160 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 C17orf99Q6UX52 265 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 GAL3ST1Q99999 423 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 REEP4Q9H6H4 257 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 GPATCH2Q9NW75 528 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 RPS6KB2Q9UBS0 482 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 FBXL3Q9UKT7 428 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 CORO2BQ9UQ03 480 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 RCE1Q9Y256 329 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 DYRK1BQ9Y463 629 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 NEDD8-MDP1E9PL57 170 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 LCMT2O60294 686 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 SEMA7AO75326 666 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 PITPNBP48739 271 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 MANFP55145 182 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 SORDQ00796 357 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 CNTN1Q12860 1018 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 HLXQ14774 488 aaPredicted RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 ZNF628Q5EBL2 1059 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 MANEAQ5SRI9 462 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 HSD11B1LQ7Z5J1 315 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 SLITRK4Q8IW52 837 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 VRK1Q99986 396 aaPredicted RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 PPP1R3EQ9H7J1 279 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 PLCXD1Q9NUJ7 323 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 GPN3Q9UHW5 284 aaPredicted RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 NUBP2Q9Y5Y2 271 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 TMEM189-UBE2V1I3L0A0 370 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 ZNF593O00488 134 aaPredicted RBP11.11□□□□□ -0.63
LIMK2-202ENST00000333611 SLC28A2O43868 658 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 C1SP09871 688 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 ITGB8P26012 769 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 RAD52P43351 418 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 OR10A3P58181 314 aa11.11□□□□□ -0.63
LIMK2-202ENST00000333611 EEF1A1P68104 462 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms