RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 OR2L3Q8NG85 312 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 SFXN5Q8TD22 340 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ADAMTS15Q8TE58 950 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 OSTF1Q92882 214 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 RFKQ969G6 155 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 KCNJ15Q99712 375 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 KXD1Q9BQD3 176 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 BTBD1Q9H0C5 482 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 TRPV5Q9NQA5 729 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 H2AFY2Q9P0M6 372 aaPredicted RBP11.47□□□□□ -0.57
VPS33B-201ENST00000333371 PCDHGB7Q9Y5F8 929 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 TRIOO75962 3097 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 IRGMA1A4Y4 181 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 SYT5O00445 386 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 KLF4O43474 513 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 RNF13O43567 381 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 PKLRP30613 574 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 HTR1FP30939 366 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 MAT2AP31153 395 aaKnown RBP11.47□□□□□ -0.57
VPS33B-201ENST00000333371 E2F1Q01094 437 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 GNA13Q14344 377 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 MAPK14Q16539 360 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 PUS10Q3MIT2 529 aaKnown RBP11.47□□□□□ -0.57
VPS33B-201ENST00000333371 LAMTOR1Q6IAA8 161 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ARL9Q6T311 187 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF836Q6ZNA1 936 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 TCTE3Q8IZS6 198 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 DUSP18Q8NEJ0 188 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 OR2T33Q8NG76 320 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ZCCHC10Q8TBK6 192 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ZFAND1Q8TCF1 268 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 DEDD2Q8WXF8 326 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ALG8Q9BVK2 526 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 FBXL4Q9UKA2 621 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 EXOGQ9Y2C4 368 aaKnown RBP11.47□□□□□ -0.57
VPS33B-201ENST00000333371 HSPB11Q9Y547 144 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ALPK2Q86TB3 2170 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 A0A1W2PPK0 400 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 INMT-MINDY4F8WBC2 141 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 MAGEB4O15481 346 aaPredicted RBP11.46□□□□□ -0.57
VPS33B-201ENST00000333371 TSC22D2O75157 780 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 GYPBP06028 91 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 IFI30P13284 250 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 NDUFV2P19404 249 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 MAKP20794 623 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 SIM1P81133 766 aaPredicted RBP11.46□□□□□ -0.57
VPS33B-201ENST00000333371 GPR176Q14439 515 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 TMEM35AQ53FP2 167 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 MBOAT2Q6ZWT7 520 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 SYT9Q86SS6 491 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 SAMD12Q8N8I0 201 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 OR10H4Q8NGA5 316 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 OR13C5Q8NGS8 318 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 CHFRQ96EP1 664 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 PLA2G2FQ9BZM2 168 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 LMAN2LQ9H0V9 348 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 OR52D1Q9H346 318 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF443Q9Y2A4 671 aaPredicted RBP11.46□□□□□ -0.57
VPS33B-201ENST00000333371 STON1Q9Y6Q2 735 aa11.46□□□□□ -0.57
VPS33B-201ENST00000333371 TRAV6A0A075B6T7 132 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 A0A0B4J203 849 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 ZNF860A6NHJ4 632 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 BTN3A3O00478 584 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 EML2O95834 649 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 NOS3P29474 1203 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 GDI1P31150 447 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 STAT5AP42229 794 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 ANXA11P50995 505 aaKnown RBP11.46□□□□□ -0.58
VPS33B-201ENST00000333371 RRAS2P62070 204 aaPredicted RBP11.46□□□□□ -0.58
VPS33B-201ENST00000333371 SLC3A1Q07837 685 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 CAMK2BQ13554 666 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 DUSP5Q16690 384 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 DECR1Q16698 335 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 PRR23CQ6ZRP0 262 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 CYB561A3Q8NBI2 242 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 SLC37A3Q8NCC5 494 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 OR4E2Q8NGC2 313 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 OR2L8Q8NGY9 312 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 GANCQ8TET4 914 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 CDCA3Q99618 268 aaPredicted RBP11.46□□□□□ -0.58
VPS33B-201ENST00000333371 MARVELD1Q9BSK0 173 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 TEX101Q9BY14 249 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 ACTRT3Q9BYD9 372 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 PBX4Q9BYU1 374 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 SLC6A17Q9H1V8 727 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 OR51V1Q9H2C8 321 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 NKX2-4Q9H2Z4 354 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 ACSL5Q9ULC5 683 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 CDH10Q9Y6N8 788 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 ZNF780BQ9Y6R6 833 aa11.46□□□□□ -0.58
VPS33B-201ENST00000333371 SYPP08247 313 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ZNF888P0CJ79 500 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 HTR2AP28223 471 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ACVR1BP36896 505 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ZNF136P52737 540 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 RPS7P62081 194 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 SF3A2Q15428 464 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 CST6Q15828 149 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms