RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 A0A1W2PPV9 198 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 LRIT2A6NDA9 550 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 KLF4O43474 513 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 ERGP11308 486 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 DNASE1P24855 282 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 TRA2BP62995 288 aaKnown RBP22.01■■□□□ 1.11
TSKU-201ENST00000333090 CSNK1G2P78368 415 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 DGCR2P98153 550 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 E2F1Q01094 437 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 HSF2Q03933 536 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 PXDC1Q5TGL8 231 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 GPR139Q6DWJ6 353 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 MBOAT2Q6ZWT7 520 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 LSMEM1Q8N8F7 131 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 OR56A1Q8NGH5 318 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 C12orf66Q96MD2 445 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 HCAR1Q9BXC0 346 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 ZNF224Q9NZL3 707 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 ENTPD4Q9Y227 616 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 HCFC2Q9Y5Z7 792 aa22.01■■□□□ 1.11
TSKU-201ENST00000333090 A0A1W2PR48 441 aa22■■□□□ 1.11
TSKU-201ENST00000333090 GPR171O14626 319 aa22■■□□□ 1.11
TSKU-201ENST00000333090 FUT1P19526 365 aa22■■□□□ 1.11
TSKU-201ENST00000333090 ARHGAP19Q14CB8 494 aa22■■□□□ 1.11
TSKU-201ENST00000333090 TEAD2Q15562 447 aa22■■□□□ 1.11
TSKU-201ENST00000333090 NIPAL3Q6P499 406 aa22■■□□□ 1.11
TSKU-201ENST00000333090 GID4Q8IVV7 300 aa22■■□□□ 1.11
TSKU-201ENST00000333090 CEP76Q8TAP6 659 aa22■■□□□ 1.11
TSKU-201ENST00000333090 SFXN5Q8TD22 340 aa22■■□□□ 1.11
TSKU-201ENST00000333090 GIMAP1Q8WWP7 306 aa22■■□□□ 1.11
TSKU-201ENST00000333090 YIPF5Q969M3 257 aa22■■□□□ 1.11
TSKU-201ENST00000333090 PTTG3PQ9NZH4 202 aa22■■□□□ 1.11
TSKU-201ENST00000333090 SSNA1O43805 119 aa22■■□□□ 1.11
TSKU-201ENST00000333090 TOXO94900 526 aa22■■□□□ 1.11
TSKU-201ENST00000333090 MPC2O95563 127 aa22■■□□□ 1.11
TSKU-201ENST00000333090 IFNA7P01567 189 aa22■■□□□ 1.11
TSKU-201ENST00000333090 RPS7P62081 194 aaKnown RBP22■■□□□ 1.11
TSKU-201ENST00000333090 PRR5P85299 388 aa22■■□□□ 1.11
TSKU-201ENST00000333090 ST3GAL2Q16842 350 aa22■■□□□ 1.11
TSKU-201ENST00000333090 MTFR2Q6P444 385 aa22■■□□□ 1.11
TSKU-201ENST00000333090 SLC7A7Q9UM01 511 aa22■■□□□ 1.11
TSKU-201ENST00000333090 A0A0G2JK05 382 aa22■■□□□ 1.11
TSKU-201ENST00000333090 OR5K3A6NET4 321 aa22■■□□□ 1.11
TSKU-201ENST00000333090 ERI3O43414 337 aaKnown RBP22■■□□□ 1.11
TSKU-201ENST00000333090 MRPL3P09001 348 aaKnown RBP22■■□□□ 1.11
TSKU-201ENST00000333090 ACVR1BP36896 505 aa22■■□□□ 1.11
TSKU-201ENST00000333090 CAMK2DQ13557 499 aa22■■□□□ 1.11
TSKU-201ENST00000333090 RPTNQ6XPR3 784 aa22■■□□□ 1.11
TSKU-201ENST00000333090 MEPCEQ7L2J0 689 aaKnown RBP22■■□□□ 1.11
TSKU-201ENST00000333090 ZNF687Q8N1G0 1237 aa22■■□□□ 1.11
TSKU-201ENST00000333090 LINC01555Q8NAE3 123 aa22■■□□□ 1.11
TSKU-201ENST00000333090 C17orf47Q8NEP4 570 aa22■■□□□ 1.11
TSKU-201ENST00000333090 NUP43Q8NFH3 380 aa22■■□□□ 1.11
TSKU-201ENST00000333090 ZSWIM3Q96MP5 696 aa22■■□□□ 1.11
TSKU-201ENST00000333090 PCBD2Q9H0N5 130 aa22■■□□□ 1.11
TSKU-201ENST00000333090 ERVMER34-1Q9H9K5 563 aa22■■□□□ 1.11
TSKU-201ENST00000333090 NLGN3Q9NZ94 848 aa22■■□□□ 1.11
TSKU-201ENST00000333090 RPS10-NUDT3A0A1W2PQS6 291 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 C4orf51C9J302 202 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 SLC9A3R1O14745 358 aaPredicted RBP21.99■■□□□ 1.11
TSKU-201ENST00000333090 ZIC2O95409 532 aaPredicted RBP21.99■■□□□ 1.11
TSKU-201ENST00000333090 ZGLP1P0C6A0 271 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 VSX2P58304 361 aaPredicted RBP21.99■■□□□ 1.11
TSKU-201ENST00000333090 SHC2P98077 582 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 GSG1Q2KHT4 349 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 C18orf63Q68DL7 685 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 OR9A2Q8NGT5 310 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 ABHD4Q8TB40 342 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 AHCYL2Q96HN2 611 aaKnown RBP21.99■■□□□ 1.11
TSKU-201ENST00000333090 A0A0B4J203 849 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 VEGFDO43915 354 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 MT-ND4P03905 459 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 GRK1Q15835 563 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 PRAMEF8Q5VWM4 474 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 PRAMEF7Q5VXH5 474 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 SLC39A5Q6ZMH5 540 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 ESPNLQ6ZVH7 1005 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 KIAA0907Q7Z7F0 614 aaPredicted RBP21.99■■□□□ 1.11
TSKU-201ENST00000333090 CDH24Q86UP0 819 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 SMAP2Q8WU79 429 aaPredicted RBP21.99■■□□□ 1.11
TSKU-201ENST00000333090 ADAMTS14Q8WXS8 1223 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 HGDQ93099 445 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 ARRDC3Q96B67 414 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 HHIPL1Q96JK4 782 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 NDC1Q9BTX1 674 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 MENTQ9BUN1 341 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 DPH1Q9BZG8 443 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 OR52D1Q9H346 318 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 UBQLN2Q9UHD9 624 aa21.99■■□□□ 1.11
TSKU-201ENST00000333090 CLEC3AO75596 197 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 H2AFB2P0C5Z0 115 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 CSF2RAP15509 400 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 DRD5P21918 477 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 PDX1P52945 283 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 EPHA5P54756 1037 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 ST8SIA6P61647 398 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 GALEQ14376 348 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 ZSWIM7Q19AV6 140 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 KAT2AQ92830 837 aa21.98■■□□□ 1.11
TSKU-201ENST00000333090 NXPE2Q96DL1 559 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms