RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 SAP130Q9H0E3 1048 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 QRSL1Q9H0R6 528 aaKnown RBP14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 SLC38A1Q9H2H9 487 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 RUBCNLQ9H714 662 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 FASNP49327 2511 aaKnown RBP14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 OR14I1A6ND48 311 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 SERINC4A6NH21 518 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 PRRG2O14669 202 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 LRRTM2O43300 516 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 HCRTR2O43614 444 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 TFPTP0C1Z6 253 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 HK1P19367 917 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 GCKP35557 465 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 CRISP3P54108 245 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 MTPNP58546 118 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 ZNF117Q03924 483 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 GANABQ14697 944 aaKnown RBP14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 MAPK11Q15759 364 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 MAPK14Q16539 360 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 ZNF630Q2M218 657 aaPredicted RBP14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 NDUFAF6Q330K2 333 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 GCNT6Q5T4J0 391 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 PIGWQ7Z7B1 504 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 IFNEQ86WN2 208 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 C10orf111Q8N326 155 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 OR5M9Q8NGP3 310 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 B4GALNT2Q8NHY0 566 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 SLC38A5Q8WUX1 472 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 MAL2Q969L2 176 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 SARAFQ96BY9 339 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 TMEM19Q96HH6 336 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 ANKRD27Q96NW4 1050 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 CALML5Q9NZT1 146 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 ACAD8Q9UKU7 415 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 CARD8Q9Y2G2 431 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 RPH3AQ9Y2J0 694 aaPredicted RBP14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 ARL2BPQ9Y2Y0 163 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 L3MBTL1Q9Y468 752 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 GMEB1Q9Y692 573 aa14.44□□□□□ -0.1
CCDC28A-201ENST00000332797 ESPL1Q14674 2120 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 BCKDKO14874 412 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 OIP5O43482 229 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 UBL4AP11441 157 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 BMP2P12643 396 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 COX4I1P13073 169 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 MSX1P28360 303 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 CA7P43166 264 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 SELPLGQ14242 412 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 GNA13Q14344 377 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 C4orf17Q53FE4 359 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 RPS26P11Q5JNZ5 115 aaPredicted RBP14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 ARSKQ6UWY0 536 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 FJX1Q86VR8 437 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 TREML1Q86YW5 311 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 TMCO5AQ8N6Q1 288 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 PCYOX1LQ8NBM8 494 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 RP9Q8TA86 221 aaKnown RBP14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 ZG16BQ96DA0 208 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 CCT8L2Q96SF2 557 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 SLC39A3Q9BRY0 314 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 THUMPD3Q9BV44 507 aaKnown RBP14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 MYLK2Q9H1R3 596 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 A4GALTQ9NPC4 353 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 PNPLA3Q9NST1 481 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 ADAM21Q9UKJ8 722 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 VDAC3Q9Y277 283 aa14.43□□□□□ -0.1
CCDC28A-201ENST00000332797 ZNF407Q9C0G0 2248 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 C5orf58C9J3I9 102 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 ZIC3O60481 467 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 SHOX2O60902 331 aaPredicted RBP14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 SEMA7AO75326 666 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 CYP7B1O75881 506 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 NUDT14O95848 222 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 GPX2P18283 190 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 CCR4P51679 360 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 ZNF41P51814 821 aaPredicted RBP14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 CRYZQ08257 329 aaKnown RBP14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 FGFBP1Q14512 234 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 GXYLT1Q4G148 440 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 WLSQ5T9L3 541 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 RAET1LQ5VY80 246 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 CBLN3Q6UW01 205 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 C3P1Q6ZMU1 363 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 EIF3MQ7L2H7 374 aaKnown RBP14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 DOLPP1Q86YN1 238 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 NFKBIDQ8NI38 313 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 OIT3Q8WWZ8 545 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 RCN3Q96D15 328 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 SFXN2Q96NB2 322 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 TREX2Q9BQ50 279 aaPredicted RBP14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 KLHDC3Q9BQ90 382 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 UGT2B28Q9BY64 529 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 MTHFD2LQ9H903 347 aaPredicted RBP14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 SLC5A6Q9Y289 635 aa14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 MRPS18CQ9Y3D5 142 aaKnown RBP14.42□□□□□ -0.1
CCDC28A-201ENST00000332797 A0A1B0GUH1 482 aa14.41□□□□□ -0.1
CCDC28A-201ENST00000332797 FAM47E-STBD1D6RA91 191 aa14.41□□□□□ -0.1
CCDC28A-201ENST00000332797 FXYD1O00168 92 aa14.41□□□□□ -0.1
CCDC28A-201ENST00000332797 CCL21O00585 134 aa14.41□□□□□ -0.1
CCDC28A-201ENST00000332797 ZNF264O43296 627 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms