RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 RHCEP18577 417 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PCYT1AP49585 367 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 MRPS35P82673 323 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 EPS8Q12929 822 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 FLOT2Q14254 428 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SLC10A1Q14973 349 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 NHSL2Q5HYW2 709 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TYW3Q6IPR3 259 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CHMP1BQ7LBR1 199 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 MMP21Q8N119 569 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 POU5F2Q8N7G0 328 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SLC16A11Q8NCK7 471 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 OR2M7Q8NG81 312 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PHOSPHO1Q8TCT1 267 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SLC38A5Q8WUX1 472 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PSMF1Q92530 271 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 NAF1Q96HR8 494 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TREX2Q9BQ50 279 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TMEM43Q9BTV4 400 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PCDHAC1Q9H158 963 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SLC38A1Q9H2H9 487 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TAS2R10Q9NYW0 307 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SLC25A37Q9NYZ2 338 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF223Q9UK11 482 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CORINQ9Y5Q5 1042 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TRAPPC13A5PLN9 417 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TFECO14948 347 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 EIF1BO60739 113 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ANGPTL1O95841 491 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 WDPCPO95876 746 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 LGI1O95970 557 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 MT-ATP6P00846 226 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 GSNP06396 782 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 LINGO3P0C6S8 592 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 RAP2AP10114 183 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SPINK2P20155 84 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CD96P40200 585 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CDKN2CP42773 168 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SELENOWP63302 87 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TRAM2Q15035 370 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 RFX4Q33E94 735 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CYBRD1Q53TN4 286 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 OR2A2Q6IF42 318 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ULK3Q6PHR2 472 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 IL20RBQ6UXL0 311 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 MSRB3Q8IXL7 192 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 GTPBP8Q8N3Z3 284 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 SVOPLQ8N434 492 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 OR5AK3PQ8NH89 298 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 FNDC8Q8TC99 324 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PYURFQ96I23 114 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 PRRC1Q96M27 445 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF583Q96ND8 569 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 TRIM4Q9C037 500 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 DCAF13Q9NV06 445 aaKnown RBP4.74□□□□□ -1.65
LRIT3-201ENST00000327908 CMTM6Q9NX76 183 aa4.74□□□□□ -1.65
LRIT3-201ENST00000327908 GPR179Q6PRD1 2367 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 IGHV3-20A0A0C4DH32 117 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 A0A1B0GVC2 190 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 NME4O00746 187 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 GSC2O15499 205 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 WDR1O75083 606 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 DNAJB6O75190 326 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 GOSR1O95249 250 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 SYNGR4O95473 234 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 IGHG3P01860 377 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 ZNF24P17028 368 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 GSTM3P21266 225 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 GTF2E2P29084 291 aaKnown RBP4.73□□□□□ -1.65
LRIT3-201ENST00000327908 RRM2P31350 389 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 CASP3P42574 277 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 SLC9A3P48764 834 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 MEOX1P50221 254 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 GZMMP51124 257 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 RPS6KA3P51812 740 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 DUSP2Q05923 314 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 PDK3Q15120 406 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 STK11Q15831 433 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 PGM2L1Q6PCE3 622 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 PLEKHM3Q6ZWE6 761 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 RRM2BQ7LG56 351 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 TMCO5AQ8N6Q1 288 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 SIRT6Q8N6T7 355 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 LSMEM1Q8N8F7 131 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 FDCSPQ8NFU4 85 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 ADOQ96SZ5 270 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 THTPAQ9BU02 230 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 TAPBPLQ9BX59 468 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 TAS2R1Q9NYW7 299 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 BAIAP2Q9UQB8 552 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 SLC6A5Q9Y345 797 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 ENPP4Q9Y6X5 453 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 CDHR4A6H8M9 788 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 FIGNL2A6NMB9 653 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 CENPBD1B2RD01 187 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 OR6B1O95007 311 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 MFN2O95140 757 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 VAMP5O95183 116 aa4.73□□□□□ -1.65
LRIT3-201ENST00000327908 CBX6O95503 412 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms