RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RBM45Q8IUH3 476 aaKnown RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 OR2T29Q8NH02 315 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 CNOT9Q92600 299 aaKnown RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 CCNL2Q96S94 520 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 BDH2Q9BUT1 245 aa9.4□□□□□ -0.9
VIPAS39-201ENST00000327028 DCHS1Q96JQ0 3298 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 ARGFXA6NJG6 315 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 CSTAP01040 98 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 UBL4AP11441 157 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 ENDOUP21128 410 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 SOX8P57073 446 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 CD226Q15762 336 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 B3GNTL1Q67FW5 361 aaPredicted RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 APOOLQ6UXV4 268 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF440Q8IYI8 595 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 OR10G3Q8NGC4 313 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 OR5M3Q8NGP4 307 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 PHF10Q8WUB8 498 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 NR4A3Q92570 626 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 NODALQ96S42 347 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 PIP5K1AQ99755 562 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 TBL1XR1Q9BZK7 514 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 EXOSC3Q9NQT5 275 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 TEKT2Q9UIF3 430 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 FAM32AQ9Y421 112 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 CACNA1AO00555 2505 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 TP53I11O14683 189 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 FMO6PO60774 539 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 DIRAS1O95057 198 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 CLK3P49761 638 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF136P52737 540 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 RPP38P78345 283 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF605Q86T29 641 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 RANBP3LQ86VV4 465 aaPredicted RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 MISPQ8IVT2 679 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 GPALPP1Q8IXQ4 340 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 GRHL3Q8TE85 626 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 PRRC1Q96M27 445 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 SECISBP2Q96T21 854 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 POLR2J2Q9GZM3 115 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 POLR2J3Q9H1A7 115 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 SEMA6AQ9H2E6 1030 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 NTN4Q9HB63 628 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 TESQ9UGI8 421 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 ACAD8Q9UKU7 415 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
VIPAS39-201ENST00000327028 GNGT2O14610 69 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ADAM10O14672 748 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ADAMDEC1O15204 470 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 SEMA7AO75326 666 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 SKP2Q13309 424 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 TRIP10Q15642 601 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 TMEM81Q6P7N7 255 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF550Q7Z398 422 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 MARCH3Q86UD3 253 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 GALNT16Q8N428 558 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 TMEM156Q8N614 296 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 GATSQ8NAP1 163 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 PHOSPHO1Q8TCT1 267 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 DHRS1Q96LJ7 313 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 HPF1Q9NWY4 346 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 VNN3Q9NY84 501 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ABI3Q9P2A4 366 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 APC2O95996 2303 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 J3KTA2 159 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 GTPBP1O00178 669 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 AP3D1O14617 1153 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 FFAR1O14842 300 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 EFSO43281 561 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF264O43296 627 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 NDUFB5O43674 189 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 SCO2O43819 266 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 EIF4E2O60573 245 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ANGPTL1O95841 491 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 CAPNS1P04632 268 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 UBTFL6P0CB48 400 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 PRG2P13727 222 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 GCKP35557 465 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 YAP1P46937 504 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 SPIBQ01892 262 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 GK3PQ14409 553 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 NDUFAF6Q330K2 333 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 OGFRL1Q5TC84 451 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ABHD17BQ5VST6 288 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 IL20RBQ6UXL0 311 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 OFCC1Q8IZS5 231 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 BEST3Q8N1M1 668 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 NRG4Q8WWG1 115 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 GATA6Q92908 595 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 MCHR1Q99705 422 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ZNF559Q9BR84 538 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 RTN4RQ9BZR6 473 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 LAT2Q9GZY6 243 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 ING2Q9H160 280 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 REEP1Q9H902 201 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 SH2D2AQ9NP31 389 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 A4GNTQ9UNA3 340 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 TESMINQ9Y4I5 508 aa9.38□□□□□ -0.91
VIPAS39-201ENST00000327028 CHCHD2Q9Y6H1 151 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms