RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DYNC1I2Q13409 638 aaKnown RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 LSAMPQ13449 338 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 APOOLQ6UXV4 268 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 OVCH1Q7RTY7 1134 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 KIF18BQ86Y91 864 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 AGBL5Q8NDL9 886 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 OR1N1Q8NGS0 311 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 PMM1Q92871 262 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 SPSB2Q99619 263 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 ZNF223Q9UK11 482 aaPredicted RBP16.98■□□□□ 0.31
USP39-201ENST00000323701 PCDHGB2Q9Y5G2 931 aa16.98■□□□□ 0.31
USP39-201ENST00000323701 COL5A1P20908 1838 aaPredicted RBP16.97■□□□□ 0.31
USP39-201ENST00000323701 VSTM2BA6NLU5 285 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 FLRT2O43155 660 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 SOX30O94993 753 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 OR5F1O95221 314 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 GP1BAP07359 652 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 GUSBP08236 651 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 GABRB1P18505 474 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 ITIH1P19827 911 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 ATP12AP54707 1039 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 ZNF730Q6ZMV8 503 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 C16orf47Q6ZP98 133 aaPredicted RBP16.97■□□□□ 0.31
USP39-201ENST00000323701 ANKRD37Q7Z713 158 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 OR14A16Q8NHC5 309 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 DAZLQ92904 295 aaKnown RBP16.97■□□□□ 0.31
USP39-201ENST00000323701 SLC38A4Q969I6 547 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 DGCR14Q96DF8 476 aaKnown RBP16.97■□□□□ 0.31
USP39-201ENST00000323701 FAM46AQ96IP4 442 aaKnown RBP16.97■□□□□ 0.31
USP39-201ENST00000323701 G6PC3Q9BUM1 346 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 PLA2G12AQ9BZM1 189 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 DSN1Q9H410 356 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 PCDHGA10Q9Y5H3 936 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 HSPE1-MOB4S4R3N1 261 aa16.97■□□□□ 0.31
USP39-201ENST00000323701 OMPP47874 163 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 ESRRGP62508 458 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 ILKQ13418 452 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 FGFBP1Q14512 234 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 IL11RAQ14626 422 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 CLPPQ16740 277 aaPredicted RBP16.96■□□□□ 0.31
USP39-201ENST00000323701 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.96■□□□□ 0.31
USP39-201ENST00000323701 ZNF773Q6PK81 442 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 RANBP3LQ86VV4 465 aaPredicted RBP16.96■□□□□ 0.31
USP39-201ENST00000323701 NRMQ8IXM6 262 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 IQCF1Q8N6M8 205 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 GATSQ8NAP1 163 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 RHOXF1Q8NHV9 184 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 LCORQ96JN0 433 aaPredicted RBP16.96■□□□□ 0.31
USP39-201ENST00000323701 RTN4RQ9BZR6 473 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 AMBNQ9NP70 447 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 TUBA8Q9NY65 449 aaPredicted RBP16.96■□□□□ 0.31
USP39-201ENST00000323701 NDUFA13Q9P0J0 144 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 C2orf92A0A1B0GVN3 265 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 C17orf51A8MQB3 221 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 DYRK3O43781 588 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 ONECUT2O95948 504 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 HEXBP07686 556 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 CD226Q15762 336 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 KCTD8Q6ZWB6 473 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 ACOT11Q8WXI4 607 aaPredicted RBP16.96■□□□□ 0.31
USP39-201ENST00000323701 ZNF566Q969W8 418 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 C8orf44Q96CB5 159 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 KLHDC3Q9BQ90 382 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 WWTR1Q9GZV5 400 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 EGLN3Q9H6Z9 239 aa16.96■□□□□ 0.31
USP39-201ENST00000323701 FRG2CA6NGY1 282 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 H3BN98 237 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 H3BSA7 217 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 OIP5O43482 229 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 NR0B1P51843 470 aaKnown RBP16.95■□□□□ 0.3
USP39-201ENST00000323701 NUP107P57740 925 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 PMS2P3Q13401 168 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 TRA2AQ13595 282 aaKnown RBP eCLIP16.95■□□□□ 0.3
USP39-201ENST00000323701 DECR1Q16698 335 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 XAF1Q6GPH4 301 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 GRAMD2AQ8IUY3 354 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 DRAXINQ8NBI3 349 aaPredicted RBP16.95■□□□□ 0.3
USP39-201ENST00000323701 APCDD1LQ8NCL9 501 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 GRHL3Q8TE85 626 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 ADOQ96SZ5 270 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 WDR77Q9BQA1 342 aaPredicted RBP16.95■□□□□ 0.3
USP39-201ENST00000323701 ERVK-18Q9QC07 812 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 TRAPPC13A5PLN9 417 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 ABCB7O75027 752 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 CBFA2T3O75081 653 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 ALOX12BO75342 701 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 CCDC159P0C7I6 412 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 FUT1P19526 365 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 GPR4P46093 362 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 NUDT6P53370 316 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 MC2RQ01718 297 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 NEDD8Q15843 81 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 KLHL26Q53HC5 615 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 MRPL14Q6P1L8 145 aaKnown RBP16.95■□□□□ 0.3
USP39-201ENST00000323701 CD300LDQ6UXZ3 194 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 SPARTQ8N0X7 666 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 NFAM1Q8NET5 270 aaPredicted RBP16.95■□□□□ 0.3
USP39-201ENST00000323701 ZNF524Q96C55 264 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 ANKRD19PQ9H560 264 aa16.95■□□□□ 0.3
USP39-201ENST00000323701 POLR1BQ9H9Y6 1135 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms