RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 TLDC2A0PJX2 215 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 C7orf72A4D263 438 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 TTC36A6NLP5 189 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 NPHS1O60500 1241 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 CHEK2O96017 543 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 HMGN2P05204 90 aaKnown RBP11.06□□□□□ -0.64
TPM3-204ENST00000323144 THBDP07204 575 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 ALOX5P09917 674 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 LAMP1P11279 417 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 CREB1P16220 341 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 TBXA2RP21731 343 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 AGTR1P30556 359 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 ZNF41P51814 821 aaPredicted RBP11.06□□□□□ -0.64
TPM3-204ENST00000323144 EEFSECP57772 596 aaKnown RBP11.06□□□□□ -0.64
TPM3-204ENST00000323144 RPS3AP61247 264 aaKnown RBP11.06□□□□□ -0.64
TPM3-204ENST00000323144 VSNL1P62760 191 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 ZNF844Q08AG5 666 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 TP53BP2Q13625 1128 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 SGCBQ16585 318 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 KRTAP21-3Q3LHN1 58 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 GLYR1Q49A26 553 aaPredicted RBP11.06□□□□□ -0.64
TPM3-204ENST00000323144 FAM214BQ7L5A3 538 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 KRTCAP2Q8N6L1 136 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 OR5AK3PQ8NH89 298 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 OR2V1Q8NHB1 315 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 FAM110BQ8TC76 370 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 CHMP6Q96FZ7 201 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 SRXN1Q9BYN0 137 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 KLHL4Q9C0H6 718 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 L2HGDHQ9H9P8 463 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 NEUROD4Q9HD90 331 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 LGALS13Q9UHV8 139 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 ATP6V1HQ9UI12 483 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 EDARQ9UNE0 448 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 TMED5Q9Y3A6 229 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 SNX8Q9Y5X2 465 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 DSCAMO60469 2012 aa11.06□□□□□ -0.64
TPM3-204ENST00000323144 A0A0J9YW62 118 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CENPVL1A0A0U1RR11 272 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 LINC01387J3KSC0 135 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CASKO14936 926 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 PEX11AO75192 247 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 C6orf47O95873 294 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 SFTPDP35247 375 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 SOAT1P35610 550 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 ASMTP46597 345 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 RPS26P62854 115 aaKnown RBP11.05□□□□□ -0.64
TPM3-204ENST00000323144 EEF1A1P68104 462 aaKnown RBP11.05□□□□□ -0.64
TPM3-204ENST00000323144 POU6F2P78424 691 aaPredicted RBP11.05□□□□□ -0.64
TPM3-204ENST00000323144 NKX6-1P78426 367 aaPredicted RBP11.05□□□□□ -0.64
TPM3-204ENST00000323144 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
TPM3-204ENST00000323144 EEF1A1P5Q5VTE0 462 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CDC73Q6P1J9 531 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CBLN3Q6UW01 205 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 OLIG3Q7RTU3 272 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CNPY4Q8N129 248 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CIARTQ8N365 385 aaPredicted RBP11.05□□□□□ -0.64
TPM3-204ENST00000323144 OR6Y1Q8NGX8 325 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 OR6K3Q8NGY3 331 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CEP70Q8NHQ1 597 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 PPP1R14CQ8TAE6 165 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 TCP10LQ8TDR4 215 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 ZBTB8AQ96BR9 441 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 ZNF524Q96C55 264 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 PERPQ96FX8 193 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 PKNOX2Q96KN3 472 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 CCL19Q99731 98 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 SERHL2Q9H4I8 314 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 C12orf49Q9H741 205 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 COQ10BQ9H8M1 238 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 ZNF226Q9NYT6 803 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 TRAF6Q9Y4K3 522 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 KCNE3Q9Y6H6 103 aa11.05□□□□□ -0.64
TPM3-204ENST00000323144 A0A087WZY1 265 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 UQCRHLA0A096LP55 91 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.04□□□□□ -0.64
TPM3-204ENST00000323144 A0A1W2PQD3 144 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 C16orf97H3BN30 126 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 SCDO00767 359 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 LYPLA1O75608 230 aaPredicted RBP11.04□□□□□ -0.64
TPM3-204ENST00000323144 PLGP00747 810 aaPredicted RBP11.04□□□□□ -0.64
TPM3-204ENST00000323144 NUDT17P0C025 328 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 LINGO3P0C6S8 592 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 NID1P14543 1247 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 PCYT1AP49585 367 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 FGFBP1Q14512 234 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 TOMM34Q15785 309 aaPredicted RBP11.04□□□□□ -0.64
TPM3-204ENST00000323144 DCST2Q5T1A1 773 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 HBMQ6B0K9 141 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 STAC2Q6ZMT1 411 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 WDR75Q8IWA0 830 aaKnown RBP11.04□□□□□ -0.64
TPM3-204ENST00000323144 CLEC4FQ8N1N0 589 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 RIBC1Q8N443 379 aaPredicted RBP11.04□□□□□ -0.64
TPM3-204ENST00000323144 ZNF614Q8N883 585 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 OR5D16Q8NGK9 328 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 B4GALNT2Q8NHY0 566 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 RNF128Q8TEB7 428 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 MTERF3Q96E29 417 aa11.04□□□□□ -0.64
TPM3-204ENST00000323144 GMPPAQ96IJ6 420 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms