RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CATSPERGQ6ZRH7 1159 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CLEC4DQ8WXI8 215 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SLAMF7Q9NQ25 335 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GPRC5BQ9NZH0 403 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SCML2Q9UQR0 700 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 MALRD1Q5VYJ5 2156 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TRDV1A0A1B0GX56 115 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF587BE7ETH6 402 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 IDH3GP51553 393 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NRG3P56975 720 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ISL1P61371 349 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 FPGSQ05932 587 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CLLU1Q5K131 121 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 XAF1Q6GPH4 301 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SLC22A25Q6T423 547 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CDH26Q8IXH8 852 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 LRRC56Q8IYG6 542 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR52H1Q8NGJ2 320 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GABARAPL3Q9BY60 117 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CNTNAP3Q9BZ76 1288 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SLC22A11Q9NSA0 550 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 RPS10-NUDT3A0A1W2PQS6 291 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF623O75123 536 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TCRBP04435 133 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR12D1P0DN82 309 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 RPS10P46783 165 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 LSSP48449 732 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 IRF5Q13568 498 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GLB1L2Q8IW92 636 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 RDH10Q8IZV5 341 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 LFNGQ8NES3 379 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 THEM6Q8WUY1 208 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TM9SF4Q92544 642 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OPALINQ96PE5 141 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TAPBPLQ9BX59 468 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ADAP2Q9NPF8 381 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 MYEF2Q9P2K5 600 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ARGFXA6NJG6 315 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NCR1O76036 304 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 RRASP10301 218 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CMPK1P30085 196 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 PLA2G7Q13093 441 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.67□□□□□ -1.341e-7■■■■□ 20.5
SMC1A-201ENST00000322213 SPIN3Q5JUX0 258 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SFXN4Q6P4A7 337 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 UNQ6126/PRO20091Q6UXV3 157 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR5M3Q8NGP4 307 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 AKR7LQ8NHP1 331 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 THAP4Q8WY91 577 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 LIN37Q96GY3 246 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 BTF3L4Q96K17 158 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR52A5Q9H2C5 316 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GOLGA2P5Q9HBQ8 144 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SDHAF3Q9NRP4 125 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TREX1Q9NSU2 369 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TSPAN11A1L157 253 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 POP4O95707 220 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SNRNP70P08621 437 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR4K1Q8NGD4 311 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR8J2Q8NGG1 315 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 C3orf30Q96M34 536 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TRMT61BQ9BVS5 477 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OSER1Q9NX31 292 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 MAS1P04201 325 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ITGA5P08648 1049 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GAAP10253 952 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 PIPP12273 146 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SPNP16150 400 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ARNTP27540 789 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TAF10Q12962 218 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ODF4Q2M2E3 257 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 POM121L1PQ3SYA9 428 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GTDC1Q4AE62 458 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ALG10Q5BKT4 473 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SAXO2Q658L1 398 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NPWQ8N729 165 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ARRDC4Q8NCT1 418 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 HMGB4Q8WW32 186 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 C16orf58Q96GQ5 468 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SLAMF8Q9P0V8 285 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NDRG4Q9ULP0 352 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NBASA2RRP1 2371 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SYN3O14994 580 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 FCN2Q15485 313 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 RGNQ15493 299 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 COL13A1Q5TAT6 717 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-201ENST00000322213 FCRLBQ6BAA4 426 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SIAH3Q8IW03 269 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR5AK2Q8NH90 309 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 MED17Q9NVC6 651 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 VNN3Q9NY84 501 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM72A0PK05 275 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 OR6C75A6NL08 312 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 SCDO00767 359 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 ADAM11O75078 769 aa6.66□□□□□ -1.34
SMC1A-201ENST00000322213 CELF2O95319 508 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms