RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SPNS1Q9H2V7 528 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 KLHL31Q9H511 634 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ZDHHC4Q9NPG8 344 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 KLHL9Q9P2J3 617 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 GON4LQ3T8J9 2241 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PLXNB2O15031 1838 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 GXYLT2A0PJZ3 443 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC9B1P1A6NJY1 282 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SYT5O00445 386 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 XKRYO14609 159 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 RBBP9O75884 186 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 RASGRP1O95267 797 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 RFX2P48378 723 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 POMZP3Q6PJE2 187 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF322Q6U7Q0 402 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ABHD13Q7L211 337 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 OR2L5Q8NG80 312 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 OR56B4Q8NH76 319 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 CCDC107Q8WV48 283 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SMPDL3BQ92485 455 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 RAB7BQ96AH8 199 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ZMYND19Q96E35 227 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 MS4A4EQ96PG1 132 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 CNN2Q99439 309 aaKnown RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 FGF20Q9NP95 211 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 EMC7Q9NPA0 242 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 NANSQ9NR45 359 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 MBD1Q9UIS9 605 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SCP2D1Q9UJQ7 156 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 OR14I1A6ND48 311 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 PRAF2O60831 178 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 PRKRAO75569 313 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ALDOBP05062 364 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 GYPBP06028 91 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ITGB7P26010 798 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 AK4P27144 223 aaPredicted RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 GABRA3P34903 492 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 PCBP3P57721 371 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 GPLD1P80108 840 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 CRYZQ08257 329 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 CLPPQ16740 277 aaPredicted RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 AMZ1Q400G9 498 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 WASH2PQ6VEQ5 465 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 EXO5Q9H790 373 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 FKBP14Q9NWM8 211 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 NUP50Q9UKX7 468 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 VNN2O95498 520 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 APODP05090 189 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 GKN3PP0CG01 181 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 SNRPBP14678 240 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 MAPK3P27361 379 aaPredicted RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ITPKBP27987 946 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 NDUFS1P28331 727 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 GDI2P50395 445 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 PDE7AQ13946 482 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 TMEM201Q5SNT2 666 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 C1orf94Q6P1W5 598 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ASPGQ86U10 573 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ADGRF3Q8IZF5 1079 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 GPR32P1Q8NGA4 272 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 CDS1Q92903 461 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 TCEAL4Q96EI5 215 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 METTL17Q9H7H0 456 aaPredicted RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 OR1A2Q9Y585 309 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 CACNA1CQ13936 2221 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 TEX51A0A1B0GUA7 166 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ELOA3DA6NLF2 546 aaPredicted RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 AGAP14A8MT82 685 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ARPC1BO15143 372 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 SCO2O43819 266 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC25A12O75746 678 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 FPR3P25089 353 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 PRDX1Q06830 199 aaKnown RBP11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF79Q15937 498 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ELOA3BQ3SY89 546 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ELOA3Q8NG57 546 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 ABRACLQ9P1F3 81 aa11.93□□□□□ -0.5
DNMT3A-202ENST00000321117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 CD2P06729 351 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 NTHL1P78549 312 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 ODF4Q2M2E3 257 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 PUS10Q3MIT2 529 aaKnown RBP11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 CST9Q5W186 159 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 TMED4Q7Z7H5 227 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 GPR135Q8IZ08 494 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 ADAMTS14Q8WXS8 1223 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 THAP4Q8WY91 577 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 INPP5EQ9NRR6 644 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 MYO9BQ13459 2157 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 ARID1BQ8NFD5 2236 aaPredicted RBP11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 MYO16Q9Y6X6 1858 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 TMPRSS11DO60235 418 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 SEMG1P04279 462 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 UCHL1P09936 223 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 GALEQ14376 348 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 GAS6Q14393 721 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 MBOAT2Q6ZWT7 520 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 TMPRSS12Q86WS5 348 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms