RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GRHL3Q8TE85 626 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 MOV10Q9HCE1 1003 aaKnown RBP16.21■□□□□ 0.19
COL9A1-201ENST00000320755 HEBP2Q9Y5Z4 205 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 CDH10Q9Y6N8 788 aa16.21■□□□□ 0.19
COL9A1-201ENST00000320755 ZGLP1P0C6A0 271 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 SAGP10523 405 aaPredicted RBP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 MAKP20794 623 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 CTBP2P56545 445 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 SUZ12Q15022 739 aaKnown RBP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 MRPL2Q5T653 305 aaKnown RBP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 PAMR1Q6UXH9 720 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF761Q86XN6 746 aaPredicted RBP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF485Q8NCK3 441 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 MCOLN1Q9GZU1 580 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 TRDV1A0A1B0GX56 115 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 B4DXG7 233 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 OR5F1O95221 314 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 POU2F2P09086 479 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 LAMP2P13473 410 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 CPMP14384 443 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 HOXB2P14652 356 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF628Q5EBL2 1059 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 IDNKQ5T6J7 187 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 SDE2Q6IQ49 451 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 TMEM99Q8N816 258 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 COX18Q8N8Q8 333 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 CYB561A3Q8NBI2 242 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 TRPV4Q9HBA0 871 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 OBP2AQ9NY56 170 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 DAPP1Q9UN19 280 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 SIRT4Q9Y6E7 314 aaPredicted RBP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 PRUNE2Q8WUY3 3088 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 PRR19A6NJB7 356 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 BMP7P18075 431 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 HTR2AP28223 471 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 TEAD1P28347 426 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 HTR1FP30939 366 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 NTSR1P30989 418 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF136P52737 540 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 RAB25P57735 213 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 ASAH1Q13510 395 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 BCL2A1Q16548 175 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 FAM27D1Q5T7N8 215 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 HEPHL1Q6MZM0 1159 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 FIGLAQ6QHK4 219 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 IL20RBQ6UXL0 311 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 FANK1Q8TC84 345 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 SENP5Q96HI0 755 aaPredicted RBP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 OR2A5Q96R48 311 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 IFT27Q9BW83 186 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 PLSCR3Q9NRY6 295 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 MAT2BQ9NZL9 334 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 USP36Q9P275 1121 aaKnown RBP16.2■□□□□ 0.18
COL9A1-201ENST00000320755 ITGB1BP2Q9UKP3 347 aa16.2■□□□□ 0.18
COL9A1-201ENST00000320755 UNC119BA6NIH7 251 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 KLF8O95600 359 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 INPP1P49441 399 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 CEBPEQ15744 281 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 LCN1P1Q5VSP4 162 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF322Q6U7Q0 402 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 KIAA1324Q6UXG2 1013 aaKnown RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 TMEM52Q8NDY8 209 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 SIPA1Q96FS4 1042 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 FRMD6Q96NE9 622 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 ATF6BQ99941 703 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 SARGQ9BW04 601 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 SIDT1Q9NXL6 827 aaKnown RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 BRWD1Q9NSI6 2320 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 TRAV27A0A087WT01 109 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 GNB5O14775 395 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 HMGN1P05114 100 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 GYPBP06028 91 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 UGT2B7P16662 529 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 FGF9P31371 208 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 TSFMP43897 325 aaKnown RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 SRSF5Q13243 272 aaKnown RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 ENPP2Q13822 863 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 OR1Q1Q15612 314 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF542PQ5EBM4 170 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 ARL9Q6T311 187 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 RANBP3LQ86VV4 465 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-201ENST00000320755 OR52L1Q8NGH7 329 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 OR13C2Q8NGS9 318 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 DEPDC7Q96QD5 511 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 CD180Q99467 661 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 MED18Q9BUE0 208 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 B3GAT2Q9NPZ5 323 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 KCNE5Q9UJ90 142 aa16.19■□□□□ 0.18
COL9A1-201ENST00000320755 FGF17O60258 216 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 CLUP10909 449 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 ACSL1P33121 698 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 GABRA3P34903 492 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 SHC2P98077 582 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 QPRTQ15274 297 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 ARHGAP11BQ3KRB8 267 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 DCST2Q5T1A1 773 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 PLET1Q6UQ28 207 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 THSD4Q6ZMP0 1018 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms