RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 C14orf28Q4W4Y0 310 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 SNAP47Q5SQN1 464 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 SLC36A4Q6YBV0 504 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 HSDL2Q6YN16 418 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ZNF620Q6ZNG0 422 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 SHFQ7M4L6 423 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ATCAYQ86WG3 371 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 C17orf82Q86X59 251 aaPredicted RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 SNX29P2Q8IUI4 249 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ZNF595Q8IYB9 648 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 SPEM1Q8N4L4 309 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 AMER2Q8N7J2 671 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 NANOGP1Q8N7R0 232 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PROKR2Q8NFJ6 384 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 OR6Q1Q8NGQ2 317 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 OR4Q3Q8NH05 313 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PFN4Q8NHR9 129 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 C1orf216Q8TAB5 229 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 GRHL3Q8TE85 626 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 TMEM239Q8WW34 195 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 CNOT9Q92600 299 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 OTULINQ96BN8 352 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 SAMD8Q96LT4 415 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 NELL2Q99435 816 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 YIPF2Q9BWQ6 316 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PRRG3Q9BZD7 231 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 C6orf62Q9GZU0 229 aaPredicted RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 UCK1Q9HA47 277 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 HHATLQ9HCP6 504 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 EXOSC4Q9NPD3 245 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 C20orf141Q9NUB4 165 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 GALNT8Q9NY28 637 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 TESQ9UGI8 421 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 LSM2Q9Y333 95 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 CLDN16Q9Y5I7 305 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 MUC3AQ02505 3323 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 SNTNA6NMZ2 147 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 WWP2O00308 870 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 KLF4O43474 513 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PRKNO60260 465 aaPredicted RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 SLC2A10O95528 541 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 IGKV1D-16P01601 117 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 DCNP07585 359 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 BMP4P12644 408 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 IFI30P13284 250 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 CD1CP29017 333 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 UGT2B10P36537 528 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ETV5P41161 510 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 GCGRP47871 477 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 MTNR1AP48039 350 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ETV1P50549 477 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 OR1D5P58170 312 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 INAQ16352 499 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 TIMM50Q3ZCQ8 353 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ZNF404Q494X3 552 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 KLHL22Q53GT1 634 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 MRGPREQ86SM8 312 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 POGLUT1Q8NBL1 392 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 RCBTB1Q8NDN9 531 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 KBTBD8Q8NFY9 601 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 OR2T33Q8NG76 320 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 OR6C4Q8NGE1 309 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 RNFT2Q96EX2 444 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 ZDHHC12Q96GR4 267 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 VSTM2LQ96N03 204 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PTCHD1Q96NR3 888 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 TEX12Q9BXU0 123 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 WDR12Q9GZL7 423 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 PALMDQ9NP74 551 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 KRCC1Q9NPI7 259 aaPredicted RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 DIMT1Q9UNQ2 313 aaKnown RBP7.01□□□□□ -1.29
IFT88-201ENST00000319980 ERVK-19Q9WJR5 959 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PCDHGA3Q9Y5H0 932 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 CSNK1G3Q9Y6M4 447 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 RNF215Q9Y6U7 377 aa7.01□□□□□ -1.29
IFT88-201ENST00000319980 PNMA8CA0A1B0GUJ8 204 aa7□□□□□ -1.29
IFT88-201ENST00000319980 DSCR3O14972 297 aa7□□□□□ -1.29
IFT88-201ENST00000319980 ADAM11O75078 769 aa7□□□□□ -1.29
IFT88-201ENST00000319980 PIAS2O75928 621 aa7□□□□□ -1.29
IFT88-201ENST00000319980 RAB36O95755 333 aa7□□□□□ -1.29
IFT88-201ENST00000319980 MYF5P13349 255 aa7□□□□□ -1.29
IFT88-201ENST00000319980 MYL12AP19105 171 aa7□□□□□ -1.29
IFT88-201ENST00000319980 MAKP20794 623 aa7□□□□□ -1.29
IFT88-201ENST00000319980 GPR3P46089 330 aa7□□□□□ -1.29
IFT88-201ENST00000319980 ATP1A4Q13733 1029 aa7□□□□□ -1.29
IFT88-201ENST00000319980 TCTE1Q5JU00 501 aa7□□□□□ -1.29
IFT88-201ENST00000319980 PRAMEF17Q5VTA0 474 aa7□□□□□ -1.29
IFT88-201ENST00000319980 GARNL3Q5VVW2 1013 aa7□□□□□ -1.29
IFT88-201ENST00000319980 LIPKQ5VXJ0 399 aa7□□□□□ -1.29
IFT88-201ENST00000319980 OGFOD3Q6PK18 319 aa7□□□□□ -1.29
IFT88-201ENST00000319980 SMARCD3Q6STE5 483 aa7□□□□□ -1.29
IFT88-201ENST00000319980 LINC00299Q6ZSB3 139 aa7□□□□□ -1.29
IFT88-201ENST00000319980 TTLL10Q6ZVT0 673 aa7□□□□□ -1.29
IFT88-201ENST00000319980 CYP4Z2PQ8N1L4 340 aa7□□□□□ -1.29
IFT88-201ENST00000319980 C16orf52Q8NHV5 167 aa7□□□□□ -1.29
IFT88-201ENST00000319980 B4GALNT2Q8NHY0 566 aa7□□□□□ -1.29
IFT88-201ENST00000319980 S100ZQ8WXG8 99 aa7□□□□□ -1.29
IFT88-201ENST00000319980 CLIP3Q96DZ5 547 aa7□□□□□ -1.29
IFT88-201ENST00000319980 ZNF285Q96NJ3 590 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms