RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ZNF704Q6ZNC4 412 aaPredicted RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 ZNF611Q8N823 705 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 CDC26Q8NHZ8 85 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 GMPPAQ96IJ6 420 aaPredicted RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 METTL2AQ96IZ6 378 aaKnown RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 MECRQ9BV79 373 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 C3orf14Q9HBI5 128 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 HHATLQ9HCP6 504 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 MIEF1Q9NQG6 463 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 DDX18Q9NVP1 670 aaKnown RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 PAQR5Q9NXK6 330 aaPredicted RBP12.74□□□□□ -0.37
RPP40-201ENST00000319533 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 STOML1Q9UBI4 398 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 EMC9Q9Y3B6 208 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
RPP40-201ENST00000319533 A0A087WZY1 265 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 ALG1L2C9J202 215 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 ADAMDEC1O15204 470 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 TYROBPO43914 113 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 SOX30O94993 753 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 NKX2-2O95096 273 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 IGKV1D-16P01601 117 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 NGFRP08138 427 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 PSMA4P25789 261 aaKnown RBP12.73□□□□□ -0.37
RPP40-201ENST00000319533 NTSP30990 170 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 GABRA3P34903 492 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 NR1H2P55055 460 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 SGCBQ16585 318 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 GRAMD1BQ3KR37 738 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 KANK2Q63ZY3 851 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 IKBIPQ70UQ0 350 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 GTPBP8Q8N3Z3 284 aaPredicted RBP12.73□□□□□ -0.37
RPP40-201ENST00000319533 ZNF764Q96H86 408 aaPredicted RBP12.73□□□□□ -0.37
RPP40-201ENST00000319533 TBL1XR1Q9BZK7 514 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
RPP40-201ENST00000319533 TNFRSF12AQ9NP84 129 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 GLRX2Q9NS18 164 aa12.73□□□□□ -0.37
RPP40-201ENST00000319533 POLR3HQ9Y535 204 aaPredicted RBP12.73□□□□□ -0.37
RPP40-201ENST00000319533 GXYLT2A0PJZ3 443 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 SHISA8B8ZZ34 492 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 NPIPB8E9PQR5 432 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
RPP40-201ENST00000319533 HS3ST1O14792 307 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 SEC22BO75396 215 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 KCNH1O95259 989 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 CHRNGP07510 517 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 BPGMP07738 259 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 NID1P14543 1247 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 CREB1P16220 341 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 PSMB1P20618 241 aaKnown RBP12.72□□□□□ -0.37
RPP40-201ENST00000319533 PRPH2P23942 346 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
RPP40-201ENST00000319533 PPP2R2BQ00005 443 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 EXOC3L2Q2M3D2 409 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 ARL13AQ5H913 290 aaPredicted RBP12.72□□□□□ -0.37
RPP40-201ENST00000319533 NOXRED1Q6NXP6 359 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 RNF165Q6ZSG1 346 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 ZCCHC23Q6ZST2 131 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 BEND4Q6ZU67 534 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 NUDCD3Q8IVD9 361 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 WDR75Q8IWA0 830 aaKnown RBP12.72□□□□□ -0.37
RPP40-201ENST00000319533 DDIASQ8IXT1 998 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 OR10D3Q8NH80 312 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 FAM110BQ8TC76 370 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 ACTRT2Q8TDY3 377 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 TMEM171Q8WVE6 324 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 LRTM1Q9HBL6 345 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 FANCFQ9NPI8 374 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 C1orf109Q9NX04 203 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 NTMQ9P121 344 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 GPR52Q9Y2T5 361 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 CCL27Q9Y4X3 112 aa12.72□□□□□ -0.37
RPP40-201ENST00000319533 FBN1P35555 2871 aaKnown RBP12.72□□□□□ -0.37
RPP40-201ENST00000319533 TM9SF1O15321 606 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 PLAUP00749 431 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 FGF4P08620 206 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 PRPS2P11908 318 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 CTBP2P56545 445 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 RAC1P63000 192 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 KRTAP1-1Q07627 177 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 KIAA0040Q15053 153 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 TNFAIP8L3Q5GJ75 292 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 CPTPQ5TA50 214 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 ADAM5Q6NVV9 412 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 OR4C3Q8NH37 302 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 SPATA3Q8NHX4 192 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 TWIST2Q8WVJ9 160 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 ZBTB8AQ96BR9 441 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 TLCD1Q96CP7 247 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 NPAS1Q99742 590 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 PRRG4Q9BZD6 226 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 ACTR6Q9GZN1 396 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 CXorf56Q9H5V9 222 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 MCTS1Q9ULC4 181 aaKnown RBP12.71□□□□□ -0.37
RPP40-201ENST00000319533 CLEC4AQ9UMR7 237 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 VDAC3Q9Y277 283 aa12.71□□□□□ -0.37
RPP40-201ENST00000319533 TRAF6Q9Y4K3 522 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms