RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 CCKBRP32239 447 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 GALNSP34059 522 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 RGS6P49758 472 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 E2F1Q01094 437 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 ALDH6A1Q02252 535 aaKnown RBP11.73□□□□□ -0.53
PTPN6-201ENST00000318974 COX10Q12887 443 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 EXOSC7Q15024 291 aaKnown RBP11.73□□□□□ -0.53
PTPN6-201ENST00000318974 INAQ16352 499 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 VWA2Q5GFL6 755 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 C12orf73Q69YU5 71 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 CD300LDQ6UXZ3 194 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 COX15Q7KZN9 410 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 LACC1Q8IV20 430 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 BMPERQ8N8U9 685 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 SLC38A9Q8NBW4 561 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 SLC16A11Q8NCK7 471 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 KBTBD8Q8NFY9 601 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 MCFD2Q8NI22 146 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 RNF31Q96EP0 1072 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 SLC25A19Q9HC21 320 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 AKAP7Q9P0M2 348 aaPredicted RBP11.73□□□□□ -0.53
PTPN6-201ENST00000318974 LIPT1Q9Y234 373 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 ASXL3Q9C0F0 2248 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 CBX7O95931 251 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 LGI1O95970 557 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 HNRNPCP07910 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 BMP4P12644 408 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 MC2RQ01718 297 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 FUT5Q11128 374 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 FOXD4Q12950 439 aaPredicted RBP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 ZNF404Q494X3 552 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 NKAIN1Q4KMZ8 207 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 GPAT3Q53EU6 434 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 CCDC157Q569K6 752 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 MEDAGQ5VYS4 303 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 CASP12Q6UXS9 341 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 WDR53Q7Z5U6 358 aaPredicted RBP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 BTLAQ7Z6A9 289 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 AMER2Q8N7J2 671 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 CDRT4Q8N9R6 151 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 MINDY2Q8NBR6 621 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 OR52R1Q8NGF1 315 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 OR8J1Q8NGP2 316 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 ZNF578Q96N58 590 aaPredicted RBP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 CTRCQ99895 268 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 FNDC11Q9BVV2 318 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 MROQ9BYG7 248 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 DSN1Q9H410 356 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 PIGUQ9H490 435 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 PARD6AQ9NPB6 346 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 SLC22A11Q9NSA0 550 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 GIN1Q9NXP7 522 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 CALML5Q9NZT1 146 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 UNC13CQ8NB66 2214 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 IGKV3D-11A0A0A0MRZ8 115 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 H3BN98 237 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 M0R3H8 397 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 RFPL3O75679 317 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 CHRM4P08173 479 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 ALOX5P09917 674 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 ACP2P11117 423 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 TNNI3P19429 210 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 S1PR1P21453 382 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 TGFBR1P36897 503 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 LIMK1P53667 647 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 DCDP81605 110 aaKnown RBP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 RHAGQ02094 409 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 TARDBPQ13148 414 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 PIN1Q13526 163 aaPredicted RBP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 TIMM50Q3ZCQ8 353 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 EXOSC6Q5RKV6 272 aaKnown RBP11.72□□□□□ -0.53
PTPN6-201ENST00000318974 C16orf62Q7Z3J2 963 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 NR4A3Q92570 626 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 PRRC1Q96M27 445 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 PINK1Q9BXM7 581 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 TGIF2Q9GZN2 237 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 PCDHGA3Q9Y5H0 932 aa11.72□□□□□ -0.53
PTPN6-201ENST00000318974 METTL15A6NJ78 407 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 ENTPD6O75354 484 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 SOX14O95416 240 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 ONECUT2O95948 504 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 CCL4P13236 92 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 RORAP35398 523 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPN6-201ENST00000318974 ZNF267Q14586 743 aaPredicted RBP11.71□□□□□ -0.53
PTPN6-201ENST00000318974 OXA1LQ15070 435 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 DUSP5Q16690 384 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 ZNF385CQ66K41 422 aaPredicted RBP11.71□□□□□ -0.53
PTPN6-201ENST00000318974 HEPHL1Q6MZM0 1159 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 PODNL1Q6PEZ8 512 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 C19orf48Q6RUI8 117 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 COMTD1Q86VU5 262 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 SNRNP27Q8WVK2 155 aaKnown RBP11.71□□□□□ -0.53
PTPN6-201ENST00000318974 CDS1Q92903 461 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 TSLPQ969D9 159 aa11.71□□□□□ -0.53
PTPN6-201ENST00000318974 TRNT1Q96Q11 434 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms