RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FERD3LQ96RJ6 166 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 OR52D1Q9H346 318 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 HEXA-AS1Q9H8Q6 139 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 KLF15Q9UIH9 416 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 ACSL5Q9ULC5 683 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 SLC7A7Q9UM01 511 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 LOC105371267A0A1B0GV96 52 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 UNC119BA6NIH7 251 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 BHLHE40O14503 412 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 TBXA2RP21731 343 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 OR10A3P58181 314 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 PUS10Q3MIT2 529 aaKnown RBP17.78■□□□□ 0.44
RTN4-201ENST00000317610 ZFPM2Q8WW38 1151 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 HGDQ93099 445 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 ART5Q96L15 291 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 OR51J1Q9H342 316 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 ERVMER34-1Q9H9K5 563 aa17.78■□□□□ 0.44
RTN4-201ENST00000317610 ZNF223Q9UK11 482 aaPredicted RBP17.78■□□□□ 0.44
RTN4-201ENST00000317610 TRAV6A0A075B6T7 132 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 DAPL1A0PJW8 107 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 MT-ND5P03915 603 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 RAF1P04049 648 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 TCRBP04435 133 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 PCCBP05166 539 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 CERS1P27544 350 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 RAB8AP61006 207 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 TOR2AQ5JU69 321 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 FAM27D1Q5T7N8 215 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 PRPF38BQ5VTL8 546 aaKnown RBP17.77■□□□□ 0.44
RTN4-201ENST00000317610 REM2Q8IYK8 340 aaPredicted RBP17.77■□□□□ 0.44
RTN4-201ENST00000317610 DTX3Q8N9I9 347 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 ZNF680Q8NEM1 530 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 OR2L8Q8NGY9 312 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 TRMT10AQ8TBZ6 339 aaKnown RBP17.77■□□□□ 0.44
RTN4-201ENST00000317610 MAP6Q96JE9 813 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 LRRC3BQ96PB8 259 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 INSM2Q96T92 566 aaPredicted RBP17.77■□□□□ 0.44
RTN4-201ENST00000317610 PRSS27Q9BQR3 290 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 SLC6A20Q9NP91 592 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 STON1Q9Y6Q2 735 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 PDE4DIPQ5VU43 2346 aa17.77■□□□□ 0.44
RTN4-201ENST00000317610 ZC3H12DA2A288 527 aaKnown RBP17.77■□□□□ 0.43
RTN4-201ENST00000317610 SLC9B1P1A6NJY1 282 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 FZD7O75084 574 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 TSC22D2O75157 780 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 LINC00271P0C7V0 271 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 TSFMP43897 325 aaKnown RBP17.77■□□□□ 0.43
RTN4-201ENST00000317610 ARL9Q6T311 187 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 SLC39A5Q6ZMH5 540 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 GPALPP1Q8IXQ4 340 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 ETFBKMTQ8IXQ9 262 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 LNX2Q8N448 690 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 TEX19Q8NA77 164 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 OR11H4Q8NGC9 324 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 ABHD4Q8TB40 342 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 SARGQ9BW04 601 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 XKR8Q9H6D3 395 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 MED20Q9H944 212 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 NTMQ9P121 344 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 COPZ2Q9P299 210 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 ZNF624Q9P2J8 865 aaPredicted RBP17.77■□□□□ 0.43
RTN4-201ENST00000317610 TBX21Q9UL17 535 aa17.77■□□□□ 0.43
RTN4-201ENST00000317610 DUXAA6NLW8 204 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 E9PI62 339 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 HOXB3P14651 431 aaPredicted RBP17.76■□□□□ 0.43
RTN4-201ENST00000317610 SRP9P49458 86 aaKnown RBP17.76■□□□□ 0.43
RTN4-201ENST00000317610 ZNF136P52737 540 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 RAG2P55895 527 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 TAS2R43P59537 309 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 NTHL1P78549 312 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 COL28A1Q2UY09 1125 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 ZNF836Q6ZNA1 936 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 IDO2Q6ZQW0 420 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 CEACAM19Q7Z692 300 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 TIGD4Q8IY51 512 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 FANK1Q8TC84 345 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 ADAMTS15Q8TE58 950 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 YIPF5Q969M3 257 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 C12orf66Q96MD2 445 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 TBX5Q99593 518 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 HCAR1Q9BXC0 346 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 CFHR5Q9BXR6 569 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 MTHFD2LQ9H903 347 aaPredicted RBP17.76■□□□□ 0.43
RTN4-201ENST00000317610 MRPS30Q9NP92 439 aaKnown RBP17.76■□□□□ 0.43
RTN4-201ENST00000317610 ZNF222Q9UK12 451 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 ZMIZ1Q9ULJ6 1067 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 TEX13CA0A0J9YWL9 993 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 TEX51A0A1B0GUA7 166 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 A0A1B0GVC2 190 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 A6NIN4 97 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 TPD52L2O43399 206 aaKnown RBP17.76■□□□□ 0.43
RTN4-201ENST00000317610 P2RY2P41231 377 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 STXBP1P61764 594 aaKnown RBP17.76■□□□□ 0.43
RTN4-201ENST00000317610 NOGQ13253 232 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 LTB4RQ15722 352 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 WDR45BQ5MNZ6 344 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 MFSD12Q6NUT3 480 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 KRT74Q7RTS7 529 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 FAM20CQ8IXL6 584 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 BMPERQ8N8U9 685 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms