RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 EIF1AXP47813 144 aaKnown RBP15.98■□□□□ 0.15
TPM1-203ENST00000317516 EXOSC6Q5RKV6 272 aaKnown RBP15.98■□□□□ 0.15
TPM1-203ENST00000317516 PDSS1Q5T2R2 415 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 CCNJQ5T5M9 372 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 BTLAQ7Z6A9 289 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 MTERF4Q7Z6M4 381 aaKnown RBP15.98■□□□□ 0.15
TPM1-203ENST00000317516 CROCCP2Q86T23 111 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 B4GALNT2Q8NHY0 566 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 CDS1Q92903 461 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 OTUB1Q96FW1 271 aaPredicted RBP15.98■□□□□ 0.15
TPM1-203ENST00000317516 DUSP26Q9BV47 211 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 CXXC4Q9H2H0 198 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 MED17Q9NVC6 651 aa15.98■□□□□ 0.15
TPM1-203ENST00000317516 NOP53Q9NZM5 478 aaKnown RBP15.98■□□□□ 0.15
TPM1-203ENST00000317516 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.98■□□□□ 0.15
TPM1-203ENST00000317516 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.98■□□□□ 0.15
TPM1-203ENST00000317516 V9GYY5 206 aaPredicted RBP15.98■□□□□ 0.15
TPM1-203ENST00000317516 HIVEP1P15822 2718 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 WDR91A4D1P6 747 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 C7orf72A4D263 438 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 TM9SF1O15321 606 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 C6orf47O95873 294 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 TUBBP07437 444 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 CD8BP10966 210 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 G6PDP11413 515 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 CD79BP40259 229 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 EIF1P41567 113 aaKnown RBP15.97■□□□□ 0.15
TPM1-203ENST00000317516 KCNJ5P48544 419 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 CLDN8P56748 225 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 RIPPLY3P57055 190 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 ABCE1P61221 599 aaKnown RBP15.97■□□□□ 0.15
TPM1-203ENST00000317516 RAC1P63000 192 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 SIRPAP78324 504 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 ZNF844Q08AG5 666 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 FAM27E3Q08E93 113 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 KEAP1Q14145 624 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 CHI3L2Q15782 390 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 PPP4R4Q6NUP7 873 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 VWA1Q6PCB0 445 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 ZAR1Q86SH2 424 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 RIMKLAQ8IXN7 391 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 KRTCAP2Q8N6L1 136 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 SFXN5Q8TD22 340 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 SH3YL1Q96HL8 342 aaPredicted RBP15.97■□□□□ 0.15
TPM1-203ENST00000317516 CXorf36Q9H7Y0 433 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 FBXO34Q9NWN3 711 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 ZNF226Q9NYT6 803 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 MCTS1Q9ULC4 181 aaKnown RBP15.97■□□□□ 0.15
TPM1-203ENST00000317516 PCDHGB4Q9UN71 923 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 PLEKHA6Q9Y2H5 1048 aa15.97■□□□□ 0.15
TPM1-203ENST00000317516 DUXAA6NLW8 204 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 SHISA8B8ZZ34 492 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 SYNGR4O95473 234 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 PLGP00747 810 aaPredicted RBP15.96■□□□□ 0.15
TPM1-203ENST00000317516 RAF1P04049 648 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 POU2F1P14859 743 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 C21orf58P58505 322 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 PGS1Q32NB8 556 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 DCST2Q5T1A1 773 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 GTF2IRD2BQ6EKJ0 949 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 PAMR1Q6UXH9 720 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 ESPNLQ6ZVH7 1005 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 FAM214BQ7L5A3 538 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 GTF2IRD2Q86UP8 949 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 GGNQ86UU5 652 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 PHOSPHO1Q8TCT1 267 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 MBD6Q96DN6 1003 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 PKNOX2Q96KN3 472 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 ALPK1Q96QP1 1244 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 CENPHQ9H3R5 247 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 FANCFQ9NPI8 374 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 GLRX2Q9NS18 164 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 GPATCH2Q9NW75 528 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 ASIC5Q9NY37 505 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 PROCRQ9UNN8 238 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 EMC9Q9Y3B6 208 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 RAP2CQ9Y3L5 183 aa15.96■□□□□ 0.15
TPM1-203ENST00000317516 DOCK7Q96N67 2140 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 KIAA1549Q9HCM3 1950 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 C16orf97H3BN30 126 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 GTPBP1O00178 669 aaKnown RBP15.95■□□□□ 0.14
TPM1-203ENST00000317516 ADAMDEC1O15204 470 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 ITM2AO43736 263 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 ZNF500O60304 480 aaPredicted RBP15.95■□□□□ 0.14
TPM1-203ENST00000317516 HRGP04196 525 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 RPL14P50914 215 aaKnown RBP15.95■□□□□ 0.14
TPM1-203ENST00000317516 ATP12AP54707 1039 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 CTBP2P56545 445 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 PPP2R2AP63151 447 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 PDCD2Q16342 344 aaPredicted RBP15.95■□□□□ 0.14
TPM1-203ENST00000317516 PLPPR5Q32ZL2 321 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 KLHL26Q53HC5 615 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 ZNF474Q6S9Z5 364 aaPredicted RBP15.95■□□□□ 0.14
TPM1-203ENST00000317516 VPS37AQ8NEZ2 397 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 OR10D3Q8NH80 312 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 RNF145Q96MT1 663 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 OPN3Q9H1Y3 402 aaPredicted RBP15.95■□□□□ 0.14
TPM1-203ENST00000317516 PLEKHF2Q9H8W4 249 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 KCNK9Q9NPC2 374 aa15.95■□□□□ 0.14
TPM1-203ENST00000317516 AKAP6Q13023 2319 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms