RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FAM107BQ9H098 131 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 FBXO44Q9H4M3 255 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF71Q9NQZ8 489 aaPredicted RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ETNK2Q9NVF9 386 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 DDIT4Q9NX09 232 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 NKIRAS1Q9NYS0 192 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SENP1Q9P0U3 644 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF624Q9P2J8 865 aaPredicted RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 RSPH14Q9UHP6 348 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 LGALS13Q9UHV8 139 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 PLA2G4CQ9UP65 541 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 ANGPTL3Q9Y5C1 460 aa3.52□□□□□ -1.85
SMCO3-201ENST00000316048 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.52□□□□□ -1.85
SMCO3-201ENST00000316048 SF3B1O75533 1304 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 A0A087WZ39 114 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 IQANK1A0A1B0GTG1 560 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 A0A1W2PR80 420 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM89A2RUT3 159 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 ARHGAP42A6NI28 874 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 ANHXE9PGG2 379 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 TRDMT1O14717 391 aaKnown RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 CYTIPO60759 359 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 AKR7A3O95154 331 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 FAM107AO95990 144 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 F7P08709 466 aaPredicted RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 GSTA2P09210 222 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 SLC2A2P11168 524 aaPredicted RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 SLC2A3P11169 496 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 CEACAM1P13688 526 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 MAGEA6P43360 314 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 TPI1P60174 286 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 GBE1Q04446 702 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 SMARCB1Q12824 385 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 KCNJ11Q14654 390 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 PAFAH1B3Q15102 231 aaKnown RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 SPHARQ15513 63 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 KIAA1644Q3SXP7 199 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 TTC31Q49AM3 519 aaPredicted RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 BRMS1LQ5PSV4 323 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF776Q68DI1 518 aaPredicted RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 NCBP2-AS2Q69YL0 99 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 FCRLAQ7L513 359 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 PYROXD2Q8N2H3 581 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM99Q8N816 258 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM178AQ8NBL3 297 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 OR13C5Q8NGS8 318 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 OR10T2Q8NGX3 314 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 GIMAP1Q8WWP7 306 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 CHMP6Q96FZ7 201 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF486Q96H40 463 aaPredicted RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 QKIQ96PU8 341 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 XPO6Q96QU8 1125 aaKnown RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 CCT8L2Q96SF2 557 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 CYTH2Q99418 400 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 PAIP2Q9BPZ3 127 aaKnown RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 MAN2C1Q9NTJ4 1040 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 RABL2AQ9UBK7 228 aaPredicted RBP3.51□□□□□ -1.85
SMCO3-201ENST00000316048 COPS7AQ9UBW8 275 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 OR12D3Q9UGF7 316 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 GRID1Q9ULK0 1009 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 PLCL2Q9UPR0 1127 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 OR1A2Q9Y585 309 aa3.51□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM120BA0PK00 339 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SH3PXD2BA1X283 911 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SMIM1B2RUZ4 78 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 AP3B1O00203 1094 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CLN5O75503 358 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TRIM16O95361 564 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CPNE6O95741 557 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CLPTM1O96005 669 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CXCL10P02778 98 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 APRTP07741 180 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 UMODP07911 640 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ERVK-10P10266 1014 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 MLNP12872 115 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 RPL35AP18077 110 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TPSB2P20231 275 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CCR1P32246 355 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SOX3P41225 446 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ELK3P41970 407 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 OR3A2P47893 321 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SLC18A1P54219 525 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 XGP55808 180 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 DLX5P56178 289 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 HERV-K104P61576 105 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 YWHAGP61981 247 aaKnown RBP eCLIP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CSNK2BP67870 215 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CNTN1Q12860 1018 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TSTA3Q13630 321 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TMED2Q15363 201 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TPSAB1Q15661 275 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PARP6Q2NL67 630 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF672Q499Z4 452 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PDLIM3Q53GG5 364 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CLLU1OSQ5K130 101 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ANKRD22Q5VYY1 191 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 WBP2NLQ6ICG8 309 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PID1Q7Z2X4 250 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PTAR1Q7Z6K3 402 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TAF8Q7Z7C8 310 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms