RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TBX19O60806 448 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 CPEP16870 476 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 HIST1H1TP22492 207 aaPredicted RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 OR12D2P58182 307 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 HBG1P69891 147 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 HBG2P69892 147 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF266Q14584 549 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PRICKLE2Q7Z3G6 844 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 CARFQ8N187 725 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 OR5AK2Q8NH90 309 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 STT3BQ8TCJ2 826 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 MAP6Q96JE9 813 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 WDFY2Q96P53 400 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 LYRM4Q9HD34 91 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 DNAJC27Q9NZQ0 273 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 CHRM2P08172 466 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PGAM2P15259 253 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PSMB1P20618 241 aaKnown RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 MALLQ13021 153 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ENPP6Q6UWR7 440 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ADGRF3Q8IZF5 1079 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 LSM14AQ8ND56 463 aaKnown RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SCAMP5Q8TAC9 235 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 NINJ1Q92982 152 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SLC6A7Q99884 636 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 GLIS2Q9BZE0 524 aaPredicted RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ENY2Q9NPA8 101 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SDHAF2Q9NX18 166 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF391Q9UJN7 358 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 FBXL4Q9UKA2 621 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 NUMBLQ9Y6R0 609 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 OR2A25A4D2G3 310 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 TMEM233B4DJY2 109 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SYN1P17600 705 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 VAMP1P23763 118 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 PIGAP37287 484 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 FLI1Q01543 452 aaPredicted RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SLAMF1Q13291 335 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 MPPED2Q15777 294 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 TMEM164Q5U3C3 297 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 JAGN1Q8N5M9 183 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 NRG4Q8WWG1 115 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 SGK494L7N484 410 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 GFRA2O00451 464 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF254O75437 659 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 MAT2AP31153 395 aaKnown RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 LIMK1P53667 647 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ERVPABLB-1P60509 514 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 GRM7Q14831 915 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 LAPTM4AQ15012 233 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 ZER1Q7Z7L7 766 aa8.32□□□□□ -1.08
COL6A5-202ENST00000312481 CPPED1Q9BRF8 314 aaPredicted RBP8.32□□□□□ -1.08
COL6A5-202ENST00000312481 J3QRK9 145 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 M0R036 132 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 RPS24P62847 133 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 RAB30Q15771 203 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 PLXDC1Q8IUK5 500 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF283Q8N7M2 679 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 FOXJ1Q92949 421 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF350Q9GZX5 532 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 MED6O75586 246 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CDKN2DP55273 166 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 RAPSNQ13702 412 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 C22orf42Q6IC83 251 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ADAMTSL4Q6UY14 1074 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SYS1Q8N2H4 156 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SH3RF2Q8TEC5 729 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 RSC1A1Q92681 617 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CNTNAP3BQ96NU0 1288 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ZDHHC5Q9C0B5 715 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ACSS2Q9NR19 701 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ANKRD61A6NGH8 418 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ALX3O95076 343 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CLDN7O95471 211 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CSTAP01040 98 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 PTHP01270 115 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 KLK3P07288 261 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 GALEQ14376 348 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 GANABQ14697 944 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF627Q7L945 461 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 SLC46A3Q7Z3Q1 461 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 C7orf61Q8IZ16 206 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 HHIPL1Q96JK4 782 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 HHLA2Q9UM44 414 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR1A2Q9Y585 309 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 EEF1E1O43324 174 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 PIAS1O75925 651 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 HOXA11P31270 313 aaPredicted RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 GP2P55259 537 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 RAB1AP62820 205 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 PLP2Q04941 152 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 PTPRCAPQ14761 206 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CNN3Q15417 329 aaKnown RBP8.31□□□□□ -1.08
COL6A5-202ENST00000312481 WDR45BQ5MNZ6 344 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OVCH1Q7RTY7 1134 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 CMTM8Q8IZV2 173 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 OR5H2Q8NGV7 314 aa8.31□□□□□ -1.08
COL6A5-202ENST00000312481 RNF141Q8WVD5 230 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms