RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 AGAP20933 346 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 SRSF1Q07955 248 aaKnown RBP eCLIP18■□□□□ 0.47
VEGFB-201ENST00000309422 MMEL1Q495T6 779 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 GLYR1Q49A26 553 aaPredicted RBP18■□□□□ 0.47
VEGFB-201ENST00000309422 DDX59Q5T1V6 619 aaKnown RBP eCLIP18■□□□□ 0.47
VEGFB-201ENST00000309422 PDZK1Q5T2W1 519 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 VASNQ6EMK4 673 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 ULK2Q8IYT8 1036 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 CA5BP1Q8WTZ4 195 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 TSPEARQ8WU66 669 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 ASB5Q8WWX0 329 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 TIMP4Q99727 224 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 PRDM14Q9GZV8 571 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 VDAC3Q9Y277 283 aa18■□□□□ 0.47
VEGFB-201ENST00000309422 RELNP78509 3460 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 A1L4Q6 167 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 SERINC4A6NH21 518 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 CLIC1O00299 241 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 ZNF264O43296 627 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 H6PDO95479 791 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 CSTAP01040 98 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 SNRPB2P08579 225 aaKnown RBP17.99■□□□□ 0.47
VEGFB-201ENST00000309422 UQCRBP14927 111 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 EIF1P41567 113 aaKnown RBP17.99■□□□□ 0.47
VEGFB-201ENST00000309422 SF3A3Q12874 501 aaKnown RBP eCLIP17.99■□□□□ 0.47
VEGFB-201ENST00000309422 CBFBQ13951 182 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 KLHL26Q53HC5 615 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 LRRC74BQ6ZQY2 392 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 PEX5LQ8IYB4 626 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 ARMC7Q9H6L4 198 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.99■□□□□ 0.47
VEGFB-201ENST00000309422 TENM4Q6N022 2769 aa17.99■□□□□ 0.47
VEGFB-201ENST00000309422 H3BML4 177 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 EIF4E2O60573 245 aaKnown RBP17.98■□□□□ 0.47
VEGFB-201ENST00000309422 TNFRSF21O75509 655 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 CAPN3P20807 821 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 ZFP36L2P47974 494 aaKnown RBP17.98■□□□□ 0.47
VEGFB-201ENST00000309422 P2RX1P51575 399 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 RPS3AP61247 264 aaKnown RBP17.98■□□□□ 0.47
VEGFB-201ENST00000309422 SRYQ05066 204 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 TYW3Q6IPR3 259 aaKnown RBP17.98■□□□□ 0.47
VEGFB-201ENST00000309422 APOOLQ6UXV4 268 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 MAMDC2Q7Z304 686 aaPredicted RBP17.98■□□□□ 0.47
VEGFB-201ENST00000309422 DHDDSQ86SQ9 333 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 LACC1Q8IV20 430 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 FUNDC1Q8IVP5 155 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 SMPDL3BQ92485 455 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 PMM1Q92871 262 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 SDCCAG3Q96C92 435 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 CARD8Q9Y2G2 431 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 PCDHB14Q9Y5E9 798 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 CAPN7Q9Y6W3 813 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 BAHCC1Q9P281 2608 aa17.98■□□□□ 0.47
VEGFB-201ENST00000309422 WIPF3A6NGB9 483 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 CCDC22O60826 627 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 BCHEP06276 602 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 ETFAP13804 333 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 ZNF117Q03924 483 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 PMPCAQ10713 525 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 NFYCQ13952 458 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 CD226Q15762 336 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 ZNF141Q15928 474 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 GTDC1Q4AE62 458 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 LRIF1Q5T3J3 769 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 CPLX4Q7Z7G2 160 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 WDR60Q8WVS4 1066 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 AURKBQ96GD4 344 aaPredicted RBP17.97■□□□□ 0.47
VEGFB-201ENST00000309422 TRIB1Q96RU8 372 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 DMRTA2Q96SC8 542 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 PAIP1Q9H074 479 aaKnown RBP17.97■□□□□ 0.47
VEGFB-201ENST00000309422 FAM107BQ9H098 131 aa17.97■□□□□ 0.47
VEGFB-201ENST00000309422 GJE1A6NN92 205 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 BBIP1A8MTZ0 92 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 SEC14L5O43304 696 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 FCMRO60667 390 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 UGT2B17O75795 530 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 IL2RAP01589 272 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 DBIP07108 87 aaKnown RBP17.96■□□□□ 0.47
VEGFB-201ENST00000309422 UBTFL6P0CB48 400 aaPredicted RBP17.96■□□□□ 0.47
VEGFB-201ENST00000309422 IL7RP16871 459 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 ADSLP30566 484 aaPredicted RBP17.96■□□□□ 0.47
VEGFB-201ENST00000309422 CHRNB4P30926 498 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 GFRA1P56159 465 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 BCL2A1Q16548 175 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 ACSF3Q4G176 576 aaPredicted RBP17.96■□□□□ 0.47
VEGFB-201ENST00000309422 EMC4Q5J8M3 183 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 COX20Q5RI15 118 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 GCNT6Q5T4J0 391 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 FRRS1Q6ZNA5 592 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 P4HA3Q7Z4N8 544 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 SPATA21Q7Z572 469 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 CMIPQ8IY22 773 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 UBQLNLQ8IYU4 475 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 ANKFN1Q8N957 763 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 TMEM234Q8WY98 164 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 TTYH2Q9BSA4 534 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 RTN4RQ9BZR6 473 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 MTHFD2LQ9H903 347 aaPredicted RBP17.96■□□□□ 0.47
VEGFB-201ENST00000309422 MED17Q9NVC6 651 aa17.96■□□□□ 0.47
VEGFB-201ENST00000309422 AP4B1Q9Y6B7 739 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms